Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1141 ATGCATACTAGGATGATGAAGCATGCGGCTATGGAGATAGAATCAAGTGACAAGGGTTCTTTGGGGCCAGGGTTGAGCCCTCTGAGTGAGACTCTTTGGAGAGAAAAGACAAACACAGAGCTCATTGGAGACGTCTCGGCCAGGCTGACATGGAAGGACTTAACTGTGACTGTCACACTCAGCACGGCGGGTGAGACGCAGAATGTTCTAGAAGGTCTAACTGGCTACGCTGAGCCGGGGACCTTCACTGCTCTCATGGGGCCGTCTGGTTCCGGAAAATCTACCCTTCTTGATGCCTTGTCCGGTCGCCTCGCCGCCAATGCCTTCCTCTCTGGGACCGTTCTTCTCAATGGTCGCAAAGCCAATCTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACAACTTGATTGGGACACTAACAGTGAGAGAGACGATTTCATACTCTGCTCAGTTGCGGCTACCGGACAAGATGTCGCCGTCGGATAAGGAAGCACTTGTTGAGAGCACCATAGTGGCAATGGGGCTTCAGGATTGTGCAGACACTGTGATTGGGAACTGGCACTTGCGAGGGATAAGCGGTGGAGAAAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGATGAGGCCTAGATTGCTCTTCCTTGATGAACCTACAAGTGGACTTGACAGTGCATCAGCTTTCTTTGTGACTCAAACATTACGTGCCTTGGCAAGGGATGGAAGAACCGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTTTTCGAACTATTTGATCAATTGTACTTGCTTTCTGGGGCTGGATTTCCATGCCCTGCTTTGAGGAACCCATCAGATCACTTTCTTAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACTCTTAAAGGCTCCATGAAACTCAGGTTTGAGGCAAGTGATGATCCCCTTGATAAGATAACTACTGCTGAAGCTATCAGAACTCTCAATGAGTACTACCGAACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGACGACATATCCAAAATTAAGGGAACCGTGCTCGATGCCGGAGGAAGTCAGGCTAGTTTCTTCAGGCAGTCATACACTTTAACCAAGCGCTCGTTGATTAACATGTCAAGAGATTTTGGTTACTACTGGCTTAGGCTTGTAATCTACATTGTGGTCACTATCTGCATTGGAACCATTTATTTGAACATCGGCACAAGCTATGACTCAATTCTGGCAAGGGGCTCATGTGCATCTTTTGTGTTTGGTTTTGTAACCTTCATGTCAATTGGTGGATTCCCGTCGTTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGCCACTATGGCGTGACAGCATTTGTGATCAGCAACACGTTATCCGCTATGCCATTCCTGATGCTAATCACCTTTCTCTCGGCTACCATTTGTTACTTCATGGTTCGCCTGCATCCCGGCTTTTCACATTATGTGTTCTTTGTCTTGTGCCTTTTTGCTAGCGTTATGGTGGTAGAAAGCTTAATGATGGCCATTGCTAGTGTTGTCCCCAACTTCCTCATGGGTATCATAACTGGAGCAGGGATTCAGGGTATATTCATGTTAGTCTCTGGCTTCTTTCGGCTCCCACATGATATCCCAAAGCCATTTTGGCGCTATCCAATGTCATATATAAGTTTCCATTTTTGGTCACTACAGGGACAATACCAAAATGATCTGAGGGGCTTGCTATTCGACAACCAATCGCCGGACCTTCCCAAAATACCGGGCGAATACATCCTGGAGAACGTTTTCCAAATCAATGTGAACCGGTCGAAGTGGATCGACCTAGGGGTGATCTTCAGCATGATTCTCGTGTACCGCATCATCTTCTTTGTGATGATTAAGGTCAATGAGGATGTCACTCCTTGGGTCAGAGGTTACGTAGCAAGAAGGAGAATGCAGAACAAGAATATTGCTCCTGATGCTCTCACTCAATCTCCATCACTGAGAGCATATGTTAATAGGGACACTCGTAGAAGGTAG 2034 0.4656 MHTRMMKHAAMEIESSDKGSLGPGLSPLSETLWREKTNTELIGDVSARLTWKDLTVTVTLSTAGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSGRLAANAFLSGTVLLNGRKANLSFGTAAYVTQDDNLIGTLTVRETISYSAQLRLPDKMSPSDKEALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLNEYYRTSQHSYAAIQKVDDISKIKGTVLDAGGSQASFFRQSYTLTKRSLINMSRDFGYYWLRLVIYIVVTICIGTIYLNIGTSYDSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLMLITFLSATICYFMVRLHPGFSHYVFFVLCLFASVMVVESLMMAIASVVPNFLMGIITGAGIQGIFMLVSGFFRLPHDIPKPFWRYPMSYISFHFWSLQGQYQNDLRGLLFDNQSPDLPKIPGEYILENVFQINVNRSKWIDLGVIFSMILVYRIIFFVMIKVNEDVTPWVRGYVARRRMQNKNIAPDALTQSPSLRAYVNRDTRRR* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1141 677 Gene3D - 43 280 IPR027417 -
Amo15g1141 677 SMART AAA_5 79 250 IPR003593 -
Amo15g1141 677 CDD ABCG_EPDR 46 267 - -
Amo15g1141 677 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Amo15g1141 677 Pfam ABC-2 type transporter 365 571 IPR013525 GO:0016020|GO:0140359
Amo15g1141 677 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 15 670 - -
Amo15g1141 677 Pfam ABC transporter 72 221 IPR003439 GO:0005524
Amo15g1141 677 PANTHER OS04G0528300 PROTEIN 15 670 - -
Amo15g1141 677 MobiDBLite consensus disorder prediction 1 22 - -
Amo15g1141 677 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 293 IPR003439 GO:0005524
Amo15g1141 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 267 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1141 Amo-Chr15 90261813 90267287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1141 80 254 Calmodulin-binding Proteins AT2G36910 34.409 2.88e-11 65.1