Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1133 ATGGCTTCCGGTGACATCTCTTTCGAGGATCTTAAGAATGAGAATGTGGATCTCGAAAACATTCCCATTGAGGAAGTGTTCGTGCAACTGAAATGTAGCCGAGAGGGTTTGACATCAGCTGAAGGAGAGAAGAGGCTACAAATCTTCGGTTACAACAAACTAGAAGAGAAAAAGGATAGCAAGCTGCTTAAATTCTTGGGTTTCATGTGGAATCCATTGTCATGGGTCATGGAGGCTGCTGCTGTCATGGCCATTGCATTGGCCAATGGCGGGGGCAAGCCACCGGATTGGCAAGATTTCGTTGGTATTGTGGTGTTGCTTTTGATCAACTCAACGATTAGTTTCATTGAGGAAAACAGTGCCGGCAATGCCGCAGCTGCTTTGATGGCCGGTCTTGCACCCAAAACCAAGGTGTTGAGAGATGGAAAATGGAGTGAGGAAGAAGCAGCAATCTTGGTGCCTGGAGATTTGATCAGCATCAAGTTGGGAGATATCGTTCCTGCAGATGCTCGTCTTTTGGAAGGTGATCCTCTCAAGATTGACCAAGCTGCCCTCACCGGCGAGTCATTGCCGGTCACCAAGAACCCCGGTGATGAGGTCTTCTCTGGCTCCACATGCAAACAAGGTGAGATCGAGGCTGTTGTCATTGCCACCGGTGTCCACACCTTCTTTGGCAAGGCTGCTCATCTTGTAGAMAGCACCAACAATGTTGGTCACTTCCAACAGGTGTTGACTGCCATTGGTAACTTCTGCATCTGCTCAATTGCTGTGGGAATGCTGATTGAGATCATTGTGGTGTATCCCATCCAACAGAGGGCATACAGAGATGGTATTGATAACTTGTTGGTTCTTCTTATTGGTGGTATTCCAATTGCCATGCCAACTGTCTTGTCTGTCACCATGGCTATTGGCTCTCACCGCCTTTCCGAGCAAGGAGCCATCACCAAGAGGATGACTGCCATTGAAGAAATGGCAGGTATGGATGTTCTCTGCAGTGACAAGACCGGAACTCTCACCCTTAACAAGCTTACCGTTGACAAGGACTTGATTGAGGTCTTCCCCCCTAAGGTCGACAAGCAAACCCTTGTCTTGTTTGCTGCCAGGGCTTCCAGGGTTGAAAACCAGGATGCCATTGATGCTTCAATTGTTGGAATGTTGAGTGATCCCAAGGAGGCAAGAGCAGGAATCACCGAGGTGCATTTCTTGCCCTTCAATCCTGTGGAGAAGCGCACAGCCATTACCTACATTGATAGCAATGGAGACTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATTGAACTGTGCAAACTCAAGGGAGAGACTTTGAAGAAGGCCCATAAGATCATTGATGACTTTGCCAACCGTGGTCTGCGTGCATTGGGCGTTGCACGCCAGACTGTTTCAGCAAAGAGCAAGGAAAGCGAAGGAGAACCATGGGAGTTCTTGGGCTTGTTGCCACTTTTCGACCCTCCAAGGCATGATAGTGCAGAGACTATCCGTCGTGCTCTTGAACTCGGTGTGAATGTTAAGATGATCACCGGTGACCAACTTGCCATCGGAAAAGAAACCGGTCGTAGGCTCGGAATGGGAACCAACATGTACCCTTCATCCTCACTCCTTGGTGCTAGCAAAGACCCTGCCATTGCAGCCATTCCAATTGATGAACTGATTGAGAAGGCTGATGGATTCGCCGGAGTGTTCCCAGAGCACAAATACGAGATCGTGAAGAGACTGCAGGATAAGAAACACATAGTGGGAATGACCGGAGATGGTGTGAACGATGCACCGGCATTGAAGAAGGCAGATATCGGTATCGCAGTGGCAGATGCAACTGATGCCGCAAGAAGTGCCTCAGATATTGTGTTGACTGAGCCTGGATTGAGCGTGATTGTGAGTGCTGTGCTTACAAGCAGGGCTATCTTCCAGAGGATGAAGAACTACACCATCTATGCTGTCTCCATTACCATCCGTATTGTTTTTGGATTCATGCTTGTGGCACTCATCTGGAAGTTCGACTTCTCACCTTTCATGGTGCTCGTCATTGCCATCTTGAACGATGGAACCATCATGACCATCTCCAAGGACAGGGTCAAGCCATCTCCTCTCCCTGACTCATGGAAGCTCAAGGAAATCTTCGCCACCGGCATTGTCCTTGGTTTATACATGGCTGTCACCACTGCCTTGTTCTTCTACTTGATCCATGACACCGACTTCTTCACCAATACCTTCCACGTGGAGGCAATTTATGATAGTGAGGAGCAACTCACCTCAGCTCTATACCTTCAAGTGAGTATCATCAGTCAAGCACTCATCTTCGTGACAAGGTCAAGGGGCTGGTCCTACATTGAACGCCCTGGATTGTTGCTTGTTGTCGCCTTCCTCGCAGCACAACTGGTGGCAACTGTGGTTGCTGTGTACGCACACTGGGACTTCGCTAGAATCAACGGAATCGGGTGGAGATGGGCAGGAGCAATCTGGATCTTCAGCATTGTGACATACATCCCTCTTGATATCCTAAAGTTCTTGATCAGGTTGGGGCTGTCAGGAAGGGCATGGGACAACATGATTGACAAGAAGACCGCATTCACAACAAAGAAGGATTACGGCAAAAGCGAGAGGGAAGCTCAATGGGCTGTGGCTCAGCGCACATTGCACGGACTCCAGGTTCCTGAGACCCAACCCGCATTATCCACTGAGATCTCTGAAATCGCTGAGCAGGCCAGAAGACGTGCTGAGGCTGCAAGGCTAAGAGAACTCCACACTCTCAAGGGCCATGTTGAATCCGTCGTCAAGTTGAAGGGTCTTGACATTGATACCATCCAACAACACTACACGCTTTAA 2847 0.4907 MASGDISFEDLKNENVDLENIPIEEVFVQLKCSREGLTSAEGEKRLQIFGYNKLEEKKDSKLLKFLGFMWNPLSWVMEAAAVMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENSAGNAAAALMAGLAPKTKVLRDGKWSEEEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVXSTNNVGHFQQVLTAIGNFCICSIAVGMLIEIIVVYPIQQRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKDLIEVFPPKVDKQTLVLFAARASRVENQDAIDASIVGMLSDPKEARAGITEVHFLPFNPVEKRTAITYIDSNGDWHRSSKGAPEQIIELCKLKGETLKKAHKIIDDFANRGLRALGVARQTVSAKSKESEGEPWEFLGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGASKDPAIAAIPIDELIEKADGFAGVFPEHKYEIVKRLQDKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGLYMAVTTALFFYLIHDTDFFTNTFHVEAIYDSEEQLTSALYLQVSIISQALIFVTRSRGWSYIERPGLLLVVAFLAAQLVATVVAVYAHWDFARINGIGWRWAGAIWIFSIVTYIPLDILKFLIRLGLSGRAWDNMIDKKTAFTTKKDYGKSEREAQWAVAQRTLHGLQVPETQPALSTEISEIAEQARRRAEAARLRELHTLKGHVESVVKLKGLDIDTIQQHYTL* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1133 948 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
Amo15g1133 948 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 808 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo15g1133 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 347 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 565 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Amo15g1133 948 Gene3D - 134 218 - -
Amo15g1133 948 SFLD C1.7: P-type atpase like 313 642 - -
Amo15g1133 948 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 PRINTS H+-transporting ATPase (proton pump) signature 762 783 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g1133 948 PANTHER PLASMA MEMBRANE ATPASE 6 928 - -
Amo15g1133 948 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Amo15g1133 948 SFLD p-type atpase 313 642 IPR044492 -
Amo15g1133 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 847 IPR023298 -
Amo15g1133 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Amo15g1133 948 Gene3D - 328 627 IPR023214 -
Amo15g1133 948 SUPERFAMILY HAD-like 327 637 IPR036412 -
Amo15g1133 948 Gene3D - 343 490 IPR023299 GO:0000166
Amo15g1133 948 PANTHER CALCIUM-TRANSPORTING ATPASE 6 928 - -
Amo15g1133 948 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Amo15g1133 948 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Amo15g1133 948 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Amo15g1133 948 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Amo15g1133 948 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Amo15g1133 948 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Amo15g1133 948 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Amo15g1133 948 CDD P-type_ATPase_H 36 843 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo15g1133 948 Gene3D - 899 948 - -
Amo15g1133 948 Pfam E1-E2 ATPase 133 310 - -
Amo15g1133 948 Gene3D - 96 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1133 Amo-Chr15 89388199 89392170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1133 5 948 Primary Pumps ATPases AT3G42640 83.598 0.0 1623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1133 K01535 - gmx:100798717 1617.82