Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1130 ATGGGTTATAAGTTGATAAAGAGTTTTCTTAGAAGCTTCGGGAATAATGGTGTTGCTTCAAGATTTAATAACAATTTTGTGGTGGATGAGTTCACAGTTGCAGCCACCATTTGGGTTGATTTTGATGATGTGGATTCAATCAGAGCCAACGTTTCTTATGCCAAGGAAAAGGGACTTCTTGGCTACAGTGTGTTCCAACTTGCCAACGATGACAATTGGGTCCTTTCAAAGGCAGTAGATGAAGATCATCATAAGAGGAGGTTGTTGATAATTGTTCTGCTATCAACAGTAACTGTCATAATTCTGTTGGGAATAGTGTTTTGCTACTGCCACAGTGGAACCGCAGCCACCATTACAAAAGCATTATACAAAATAAGGAAATGTTTATCAGGAGCTGAACAAGATCATGTAGAAGGGAATGGTTCTGACTTGACTGCATTCAGTTATCTCACAATCAAAATGGCAACAAATAACTTCTCAAGAGATAATAAACTTGGAGAGGGTGGATTTGGCACGGTTTATAAGGGAAAATTACGAAAGGGGCAGGAGATAGCTGTGAAAAGGCTCTCAGAAAGCTCGAATCAAGGCCTAGAAGAGTTCAAAAATGAAATCACGCTTACAGCAAGATTACAACATGTGAATTTGGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTTTGATCTATGAATACCTACCAAACAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGCAAGCGTGCCAACATCATTGAAGGGGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTCACCATAATCCACCGAGATCTCAAAGCCAGTAATATTTTATTAGACCATAATATGAATCCCAAGATATCAGATTTTGGGATGGCAAGAATTTTCAGGAAATATGACCTTGAAGCAAACACAAGCAGGATTGTTGGGACATACGGTTATGTACCTCCTGAGTATGTGAGAAAAGGCATATACTCAACGAAGTACGATGTTTATAGCTTTGGAGTTCTTCTGTTGCAAATCATAAGTGGGAAGAGGACTTCATGTTACTATGGACCACATGAAAATATGAACCTGTTGGAATATGCATATGAGCTGTGGATGGAGGGAAGAGGTGTGGAATTTTTAGACCCTTCATTAGATGATACAACATCAGCRTGTAAACTCATGAGATGCATGCAAGTAGCTCTTTTGTGTGTTCAAGAGAACTCTGCAGATAGACCTTCCATGTTGGAAGTTGATTCAATTCTCAAGAATGAAACTGCAGCTATTGGTAGTCCCAAAATGCCTGGTTTTTCAGTGAAGAAACATGAAGATGATGAGAAAGAAAGATCCATAAAATATGTTTCAATTAATGATGTTACAATTTCTCAAATGATACCAAGATGA 1428 0.3824 MGYKLIKSFLRSFGNNGVASRFNNNFVVDEFTVAATIWVDFDDVDSIRANVSYAKEKGLLGYSVFQLANDDNWVLSKAVDEDHHKRRLLIIVLLSTVTVIILLGIVFCYCHSGTAATITKALYKIRKCLSGAEQDHVEGNGSDLTAFSYLTIKMATNNFSRDNKLGEGGFGTVYKGKLRKGQEIAVKRLSESSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPRKSILLDWSKRANIIEGVTQGLLYLQEYSNFTIIHRDLKASNILLDHNMNPKISDFGMARIFRKYDLEANTSRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGPHENMNLLEYAYELWMEGRGVEFLDPSLDDTTSACKLMRCMQVALLCVQENSADRPSMLEVDSILKNETAAIGSPKMPGFSVKKHEDDEKERSIKYVSINDVTISQMIPR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1130 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 471 - -
Amo15g1130 475 Pfam Protein kinase domain 160 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1130 475 CDD STKc_IRAK 165 432 - -
Amo15g1130 475 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Amo15g1130 475 Gene3D Glycosidases 42 72 - -
Amo15g1130 475 Gene3D Transferase(Phosphotransferase) domain 1 235 440 - -
Amo15g1130 475 SMART serkin_6 159 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1130 475 Gene3D - 2 41 IPR029070 -
Amo15g1130 475 SUPERFAMILY Protein kinase-like (PK-like) 143 441 IPR011009 -
Amo15g1130 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Amo15g1130 475 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 471 - -
Amo15g1130 475 ProSiteProfiles Protein kinase domain profile. 159 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1130 475 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 86 IPR001223 GO:0005975
Amo15g1130 475 Gene3D Phosphorylase Kinase; domain 1 121 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1130 Amo-Chr15 89374475 89376847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1130 147 475 Receptor kinase-like Gene Family AT4G11530 53.254 5.51e-119 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo15g1130 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1130 - - aprc:113847882 739.954