Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1127 ATGATTCCTAGTGAGATTGATATGAGAGGTATCCAGTATCTAGCACCAGAAAACCAATTTCTTGTTCCACCTTATAATAATGATAATAATAATAATAATAATAATAACCTCAGTTGCTTGATTCATACTGAAATCCCAACCTTCCATGATAATCTAAACACCCTCTTAACCAACATACCCATCTACAGTTACAATAACAGTAACTTCCCTTGTGCATTAGGAACTGACTTTATTGTCCCTCATAATTCGTCATGCCTCAGCAGCAACTCAACAACCTCCGACGAAGCCGACGAGCTTCCGCTCAGCGTGATTGACGAGCGGAAGCAGCGGCGGATGATATCGAACCGCGAGTCGGCTCGGAGGTCGAGGATGAGGAAGCAGAAACACCTGGACGAACTCTGGTCTCAGGTTGTTAGGCTCAGAAGCGAGAATCATAACCTTATTGACAAGCTCAACAACATGTCTGAGTCACATGATAGAGTTCTTCAGGAAAATGCAAGACTCAAGGAAGAAGCTTCCGATCTCCGCCAAATGATAGCGGAGATAAGTGGAAACTCGTTTGGTTGTGTTGTCAGAGGTTTTGATTTTGACGATGACGTCGACGACGACAACAACGATAATAATGATAATGATGATGTTCCTTGCAAGAACACTACTACTACTAAAATTCTCAGAGATGAGGAAACCAAGAACCATTTTGTTCCAATGGAGCTGTACGCGAGTGAGTTCAGATAA 735 0.4245 MIPSEIDMRGIQYLAPENQFLVPPYNNDNNNNNNNNLSCLIHTEIPTFHDNLNTLLTNIPIYSYNNSNFPCALGTDFIVPHNSSCLSSNSTTSDEADELPLSVIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRSENHNLIDKLNNMSESHDRVLQENARLKEEASDLRQMIAEISGNSFGCVVRGFDFDDDVDDDNNDNNDNDDVPCKNTTTTKILRDEETKNHFVPMELYASEFR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1127 244 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Amo15g1127 244 PANTHER BZIP PROTEIN (ATBZIP48) 1 227 - -
Amo15g1127 244 Coils Coil 137 185 - -
Amo15g1127 244 Gene3D - 105 160 - -
Amo15g1127 244 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Amo15g1127 244 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 227 IPR044521 -
Amo15g1127 244 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Amo15g1127 244 CDD bZIP_plant_GBF1 108 159 IPR045314 GO:0003700|GO:0006355
Amo15g1127 244 Pfam bZIP transcription factor 107 165 IPR004827 GO:0003700|GO:0006355
Amo15g1127 244 SUPERFAMILY Leucine zipper domain 107 156 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1127 Amo-Chr15 89150783 89151629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1127 42 200 bZIP Transcription Factor Family AT3G30530 51.705 8.72e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo15g1127 bZIP_1 8.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1127 - - aip:107641963 422.55