Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1102 ATGTTGTGGTTGTCCACTGTAAGGCTGGAACGAACAAGTTCTTTCCAATTGCTGAGGAGTCAATGGATTACTATAATCAGAAATGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTGGAAGCTGTGAAACATTTTGATCCTGGTCCTAGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGATAGAAGAAGAAAGAACAACAAAGGACTTAGTGTTTAA 255 0.4118 MLWLSTVRLERTSSFQLLRSQWITIIRNDVLMEKDLFCPVRLEAVKHFDPGPSVPHSHTKPYVRSKGRKFERDRRRKNNKGLSV* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1102 84 Gene3D - 23 83 - -
Amo15g1102 84 PANTHER 60S RIBOSOMAL PROTEIN L18 42 82 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo15g1102 84 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 42 82 - -
Amo15g1102 84 MobiDBLite consensus disorder prediction 49 84 - -
Amo15g1102 84 MobiDBLite consensus disorder prediction 61 75 - -
Amo15g1102 84 Pfam Ribosomal protein 60S L18 and 50S L18e 43 81 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1102 Amo-Chr15 86676445 86676986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1102 43 84 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 64.286 5.51e-16 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1102 K02883 - tcc:18600499 73.559