Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1082 ATGTTCCGTTACAACCTCCTCGATGAGACGCAGAACAAGCTCAATTACATCCTCTCTCTCACCGTCGAGAACTTTCTCGAGCGCCGCCTTCATATTCTCATCTTCAAGTTCGGCATAGCCCAGATGATTCCAAGTAGTGACACAAATATTACTTTCAAAGAGTTTAACAAAGTTGTAAAGTACAATCCGCATGGCTATCACAATGTCGATAAGGAGGAAAGACCTATTTACATTAAAAGGCTTGGAAAAGTAGATCCAAACAAAATCATGCAAGCTAAAACTCTTAACAGATATTTTCCTACTTGCACAATTGCTGCTAAAAGGCACATAGATTCAAACACCACGATCTTAGATGTTCAGGGCATGGGCCTTAAGAACTTTAACAAGACTGACCGAGAACTCATTATGCGATTACAAAAGATGGATAGTGACAAACTCTTTGCCAAATGTATATCATAA 459 0.3922 MFRYNLLDETQNKLNYILSLTVENFLERRLHILIFKFGIAQMIPSSDTNITFKEFNKVVKYNPHGYHNVDKEERPIYIKRLGKVDPNKIMQAKTLNRYFPTCTIAAKRHIDSNTTILDVQGMGLKNFNKTDRELIMRLQKMDSDKLFAKCIS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1082 152 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH6 50 145 - -
Amo15g1082 152 Pfam CRAL/TRIO domain 63 140 IPR001251 -
Amo15g1082 152 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 50 145 - -
Amo15g1082 152 Gene3D - 42 147 IPR036865 -
Amo15g1082 152 SUPERFAMILY CRAL/TRIO domain 55 144 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1082 Amo-Chr15 84571799 84573090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1082 1 43 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 69.767 1.41e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1082 - - minc:123213781 147.517