Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1072 ATGACACTGTATAAGAAAAACAATGAACAACAACAACAACACACCACTATCCTAGTGAACAACGAACAAACTCCTCTTCTACTACCAAACAAGATATCAAAGACAAAGACCGGCGACCCCTATAATGAGCCGCCGGCCGCATCATTTACAGGGGCCGTGTTCAATTTGTCGACCACCATCATTGGCGCCGGGATCATGGCCTTACCGGCAACCATGAAGGTTCTAGGCCTTGCCTTGGGGGTTGGTGCCATTGCGATTCTTGCTGTTCTTGCTGAGTACTCTTTGGATGTTCTGATGAGGTTCAGCAAAGTGGGGAATGCCGTAACATATTCTCAAGTCATGGAATCTGCATTTGGACGTGTTGGAAGAAGGTTGTTCCAGATATGTATCTTTGTCAACAATTTTGGGATACTTGTTGTCTACATGATTATAATTGGCGATGTGCTATCTGGAACTTCGACAACTGGAATTCATCATTTTGGTGTATTAGACGGATGGTTTGGGGAACATTGGTGGACTATGCGAACTTTTGTTCTTCTTATGACAACGCTTTTTGTTCTTGCACCACTGGCATTCTTTAAGCAAATAGATTCACTGCGATATACTTCTGCTATTGCAGTAGCTTTGGCACTTGTTTTTCTAGTCATAATTGTGGGAATCACATTCATGAAATTATTTAATGGCGGCATAACTACTCCGAGGTTGCTTCCAAATATTACAGACATGAATTCTATATGGAATCTCTTTACAGCCGTTCCAATTCTTGTGAATGCATTTGTTTGCCATTCCAATGTGCATACAATAAACATGGAGCTACAAGATTCTTCCCGAATCCAGCCAGTTGTGCGTGCATCATTGACTTTGAGTTCAGTTATCTATATTCTTACCGCCATATTTGGATTCCTTTTATTTGGTGAGTCAACGCTTGACGACGTTCTCGCCAACTTCGACGTTGACCTCGGAATCCCATACAGCAGTCTACTGAACGACATTGTTCGCATTAGTTATGCCTTCCACCTTATGCTTGTCTTCCCTGTTATCTTCTTTTCGCTACGGTTTAACTTTGATGAATTTATCTTTGCTTCATCTAAGTCTTTGAATGCAACTAAGTATAAGTTTGTTTCTACCACCATTGTACTCGTTGCTTTAGTGTATATAGCTGCAAATTTTATGCCTAGCATATGGTATGCTCTACAGTTCACAGGAGCAACTGCCACAGTTTGCATAGGCTTTGTTTTCCCGGCTGCAATATCTATAAGGGACCCTCATGGAATTGCAACAGAGAAGGATAAGATTTTATCCGTTGTCATGATTGTTCTTGCTGTGTTCTCAAATAGTTTGGCCATATACAGTAATGCAGCTTCCATGTCTGGAATAACATCTTAA 1386 0.412 MTLYKKNNEQQQQHTTILVNNEQTPLLLPNKISKTKTGDPYNEPPAASFTGAVFNLSTTIIGAGIMALPATMKVLGLALGVGAIAILAVLAEYSLDVLMRFSKVGNAVTYSQVMESAFGRVGRRLFQICIFVNNFGILVVYMIIIGDVLSGTSTTGIHHFGVLDGWFGEHWWTMRTFVLLMTTLFVLAPLAFFKQIDSLRYTSAIAVALALVFLVIIVGITFMKLFNGGITTPRLLPNITDMNSIWNLFTAVPILVNAFVCHSNVHTINMELQDSSRIQPVVRASLTLSSVIYILTAIFGFLLFGESTLDDVLANFDVDLGIPYSSLLNDIVRISYAFHLMLVFPVIFFSLRFNFDEFIFASSKSLNATKYKFVSTTIVLVALVYIAANFMPSIWYALQFTGATATVCIGFVFPAAISIRDPHGIATEKDKILSVVMIVLAVFSNSLAIYSNAASMSGITS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1072 461 Pfam Transmembrane amino acid transporter protein 47 455 IPR013057 -
Amo15g1072 461 PANTHER AMINO ACID TRANSPORTER AVT6A 9 456 - -
Amo15g1072 461 PANTHER AMINO ACID TRANSPORTER 9 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1072 Amo-Chr15 83238174 83254378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1072 1 456 Amino Acid or Auxin Permease AAAP Family AT3G30390 56.140 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1072 K14207 - gmx:100778699 582.408