Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1066 ATGGCCACAAAACCAAGAAACTCCAACACTAAGGTGTCTCTCATGGTCATGGTTACAATAATCCTAACAACATCCAATGTTGTTCTGTGTGATGATAAGACTCCAGTTCCAACTGACAGGGGACAACTGGAATCATGGTTCAACCAAAATGTGGGTCCATTGGAACAAAGAAAGAGCACTTTGGACCCTGCTCTTGTGGCGGCCGAGCAAGGTCCTAAAGTCATTAAGGTAATGCAAGACGGTAGCGGCGATTTCAAGACCATCACCGACGCCGTCAATAGCGTCCCTTCCGGGAATGCCAAGCGGGTGATAATCTCCATAGGTGCTGGGAATTACAATGAGAAGATCAAGATTGAAAGGACCAAGAATTTCATCACGTTTTATGGCGCACCTGGAGGGAACTTACCAACCTTGTCCTATGGTGGCACTGCACAACAATATGGCACTGTTGACAGTGCTACGCTGATTGTTGAATCTGATTATTTCGTCGCTGCTAACATCCAAATCTCGAATACTGCACCAAGACCTGATGGAAAGAGGCCTGGAGCACAAGCAGTAGCATTGAGAATTTCAGGAGACAAAGCAACGTTTTATAATTGCAAGGTGTTGGGATTCCAAGACACAATCTGTGACGATAGACATAGGCATTTTTTCAAAAATTGCTTAGTTCAAGGCACCGTCGATTTTATTTTCGGAAGCGGGAGGTCATTGTACCTGAACACGGAGTTGAGGGTTCTTGGGGACAGTGGAATGACAGTGATAGTGGCACAAGCAAGAACAATGGACTCACAGGACACAGCCTACGCATTTGTGCATTGCGACGTTACCGGAACAGGGACTGGCTCTTACTTGGGTAGAGCATGGATGTCTAATCCCAAAGTCATTTTTGCTTACACCACCATGACCAGTGTTATCAATCCTGTTGGTTGGAGTGACAACATGCACACTGAATATGATAGAACTTTATATTTTGGAGAGTATAAAAACTCTGGAGCTGGAGCTGCTCCCGCTGGGCGCGCCAAATTCTCAAAGCAGCTAAGTGATGCAGAGGCACAACCTTTCCTCAATCTTGGTTTCATTGACGGCTCCACTTGGCTACTTCCTCCACCAAGAGTCTAA 1119 0.4593 MATKPRNSNTKVSLMVMVTIILTTSNVVLCDDKTPVPTDRGQLESWFNQNVGPLEQRKSTLDPALVAAEQGPKVIKVMQDGSGDFKTITDAVNSVPSGNAKRVIISIGAGNYNEKIKIERTKNFITFYGAPGGNLPTLSYGGTAQQYGTVDSATLIVESDYFVAANIQISNTAPRPDGKRPGAQAVALRISGDKATFYNCKVLGFQDTICDDRHRHFFKNCLVQGTVDFIFGSGRSLYLNTELRVLGDSGMTVIVAQARTMDSQDTAYAFVHCDVTGTGTGSYLGRAWMSNPKVIFAYTTMTSVINPVGWSDNMHTEYDRTLYFGEYKNSGAGAAPAGRAKFSKQLSDAEAQPFLNLGFIDGSTWLLPPPRV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1066 372 ProSitePatterns Pectinesterase signature 2. 223 232 IPR033131 -
Amo15g1066 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 40 367 - -
Amo15g1066 372 Pfam Pectinesterase 75 362 IPR000070 GO:0030599|GO:0042545
Amo15g1066 372 Gene3D - 71 368 IPR012334 -
Amo15g1066 372 SUPERFAMILY Pectin lyase-like 72 366 IPR011050 -
Amo15g1066 372 PANTHER PECTINESTERASE 63-RELATED 40 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1066 Amo-Chr15 83003769 83006797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1066 10 372 Carbohydrate Esterase AT1G69940 56.749 7.59e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1066 K01051 - gmx:100786427 537.724