Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1039 ATGGCAGAATCGCAAGAAGAACATGTTTCAAGCAAGGGTCCTCCTTTATGCACATCACCTTGCCAAAATTCATTAATGGAGGTCGATATAGTTGAACCGTTAGTTTGTGTAGCCTCTAACGTTTCAGAAAATTTACCAGACGAACCAGAATATTTAGCCGGTGATGTCGCAGGCCACGATCACAAGTCGAACAAGGCCACGCAGTTGTCGGATGTTACAGATGTTGAAAGTGAAGAGAAGGAGCTTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTTCTCAGTTACAGATGGCACATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCATTAATCAAGCTATACACTGTAATCGCGACGGGATCCGTGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGCCGTGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACGCACTCACACCCCTGTTCACCGAGAAAGGCAGTGCACTACCATGAGTATAGGCAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGRCTGGGATTCATTTGTATGATGACCGACGCATGTGGGTCCCAATATATTTCAAGGGTGAATTTTGGGCATCAATGCGGAGTACGCAAAGGAGTGAGAGCATGCACGCATTCTACGGTGGATACTTATCCAGTAAAACTAGCTTAGTTCAATTTGTTCATGAATATGACAATGTGCTTGGAGTCAAGGAGCAGAGGGAACTGGAGGATGATGCTGCAGACTCGAGGGGGGTCATCCCTTGTGCAACGACCTCGCCTATGGAGAAACAGTTTCAACTAGAGTATACCACGAGCATTTTTAGGGATGTTCAGATTGAGTTTGTGAAGAAGGCTAACTGCAGAGTTTCTGCAATTGATGAACAGGGTCCATTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTAGTCAACGATACTATTCTATGCGTTCCGTACGATGTTCACTTTGACCGTTCCACACAGGAGCTTCGTTGTGAGTGTAATCTCTTTGAGAGTTCAGGTGTGTTGTGCTGTCACTGCCTTGAAGTGTTCCATTCGTATAAAGTGTACAAAGTACCTTCTTGTTATGTTCTTCCTCGATGGAGCAAGAAGATAAAGCGCAAGCATACATATGTCAAAAGTAGCCATGATGTCAGTCGGTCGGATGAGAGTCATGTTGCATTCAGGGGACTGTGTGCACACTTCTACAATGTTGCCCAAGAGTTTGTAGGTGACGATGAAGAAACAGCATTGCTGCATGTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTGCGCACCGTGCCAAAAAGAGGTCCGAGAGCGTGGCAGAGACTCAGACCAACATTGGCTCACAGAGTTCGAACGATGTCAGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTCGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTTACCCCCGGTGGTTCGTCCGCACACACTTGAAGATACAAACCATTGTGCTGTTTCTGGCCTGAATGGTCCCGAACAAGCCGGTTCTAAGGCAGCTGTTGCAAAGACTTAA 1749 0.4608 MAESQEEHVSSKGPPLCTSPCQNSLMEVDIVEPLVCVASNVSENLPDEPEYLAGDVAGHDHKSNKATQLSDVTDVESEEKELGDELPDHGNLQEDEIPRVGMRFSQLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKAVQDWVLFKVDLTHSHPCSPRKAVHYHEYRQLTMHAKCVIEDNDEXGIHLYDDRRMWVPIYFKGEFWASMRSTQRSESMHAFYGGYLSSKTSLVQFVHEYDNVLGVKEQRELEDDAADSRGVIPCATTSPMEKQFQLEYTTSIFRDVQIEFVKKANCRVSAIDEQGPLVCVKVEEEKLVNDTILCVPYDVHFDRSTQELRCECNLFESSGVLCCHCLEVFHSYKVYKVPSCYVLPRWSKKIKRKHTYVKSSHDVSRSDESHVAFRGLCAHFYNVAQEFVGDDEETALLHVALEETRAKLAAHRAKKRSESVAETQTNIGSQSSNDVSVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNLPPVVRPHTLEDTNHCAVSGLNGPEQAGSKAAVAKT* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1039 582 MobiDBLite consensus disorder prediction 53 93 - -
Amo15g1039 582 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Amo15g1039 582 MobiDBLite consensus disorder prediction 491 514 - -
Amo15g1039 582 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 211 IPR031052 GO:0006355
Amo15g1039 582 PANTHER OS03G0843700 PROTEIN 228 485 - -
Amo15g1039 582 PANTHER OS03G0843700 PROTEIN 78 211 - -
Amo15g1039 582 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 228 485 IPR031052 GO:0006355
Amo15g1039 582 MobiDBLite consensus disorder prediction 1 21 - -
Amo15g1039 582 MobiDBLite consensus disorder prediction 48 93 - -
Amo15g1039 582 MobiDBLite consensus disorder prediction 488 582 - -
Amo15g1039 582 ProSiteProfiles Zinc finger SWIM-type profile. 368 404 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1039 Amo-Chr15 81059778 81064119 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g1039 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1039 - - aip:107615899 649.047