Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0990 ATGCCCCCATCGACTTCAGCTACGTTAAGAGAGTTCCATGGAACCCTTCAACATGGTTCGCGCAGTACCTTAAAGCAACTACAAATTTCAACCTCCCAAAACATGAAACCTCAACCTCATGCGTCCATGATTTCCAGTCTCAGCTCAATTCATTGTCTCTCCAAAACAACCTTGTTGACTTGTGCTTTGACCCTCACTAATTGGGACAAGAAGCTTGGTCAAATCACGCCTCTTGCTACTAGTTGCAAACAAGACCTCACTGATCTTTCGCTATGTGATGTGTGTCTTACTGCGGGGTTTCAGGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGTTGCATTTGTGAATCAGTATGGATCTGAAAGTAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGGTGGTGGTTCTTGTGGGAAAAGTCACCAGGGTTTGGTTTTTGGGTTAACTGGTGTTGGTGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGCAATTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAAGGGATTTTGTCCGATGGTTCAGTCGTGGCGGTTAAGAGGATCTTAGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGAAGATTATTAGCAACCTGAAGCAACGGAATCTGGTGCCTCTTCAAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGCCAAAGGTTTTTGGTTTATGATTACATGCTGAATGGAAACCTTGAAGACCATCTGTTTCTGGTGAGTGAGCAGCAAAAGTTGAAAAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGGCTGGCTTATCTGTCGTGCGATGCATGTGTTCACGGTGATGTATTTATCGTTCAAATTCATATTAGGGTTTCAGGGACTAATGGGACGTCTTAA 1041 0.4256 MPPSTSATLREFHGTLQHGSRSTLKQLQISTSQNMKPQPHASMISSLSSIHCLSKTTLLTCALTLTNWDKKLGQITPLATSCKQDLTDLSLCDVCLTAGFQVQHKLVSIDGNASHSENCFKFTILYAVAFVNQYGSESNGAMSCIFGMSLYPQGGGSCGKSHQGLVFGLTGVGGFMFGMIGRLGGRSLMMMQFSTKNFIGRGGFGLVFKGILSDGSVVAVKRILESDFQGDVEFCNEVKIISNLKQRNLVPLQGCCVVDDDDEKFNDRGSQRFLVYDYMLNGNLEDHLFLVSEQQKLKKSLTWPQRKSIILDVAKGLAYLSCDACVHGDVFIVQIHIRVSGTNGTS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0990 346 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 25 174 - -
Amo15g0990 346 Gene3D Phosphorylase Kinase; domain 1 188 278 - -
Amo15g0990 346 SUPERFAMILY Protein kinase-like (PK-like) 192 330 IPR011009 -
Amo15g0990 346 SMART tyrkin_6 193 346 IPR020635 GO:0004713|GO:0006468
Amo15g0990 346 ProSiteProfiles Protein kinase domain profile. 193 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0990 346 Gene3D Transferase(Phosphotransferase) domain 1 279 337 - -
Amo15g0990 346 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 174 - -
Amo15g0990 346 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 192 323 - -
Amo15g0990 346 ProSitePatterns Protein kinases ATP-binding region signature. 199 221 IPR017441 GO:0005524
Amo15g0990 346 Pfam Protein tyrosine and serine/threonine kinase 196 330 IPR001245 GO:0004672|GO:0006468
Amo15g0990 346 Pfam SPARK 38 120 IPR043891 -
Amo15g0990 346 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 192 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0990 Amo-Chr15 74055095 74056289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0990 60 343 Receptor kinase-like Gene Family AT1G11050 46.440 9.83e-84 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Amo15g0990 PK_Tyr_Ser-Thr 3.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0990 - - aip:107640759 417.927