Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0953 ATGGCCTCTCAGTCTTGCGCAGCCGCACTCTTAGGCGGTTTGGCCAACGTCAACACAACGGCCGCAAACTTCATCTGCGGCCAGCTGGACGCTATTAACCAGAAGCTCACCGACACCACCTACGCCGTCGACAACACCTACCTCCTCTTCTCTGCGTACCTAGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCGGGCTCCGTCCGCGCCAAAAATACCATGAACATCATGCTTACCAATGTTCTTGACGCAGCCGCCGGTGGCCTCTCCTACTACCTCTTCGGCTATGCCTTTGCCTTCGGGGGCCCCTCCAACGGCTTCATCGGTCGCCACTTCTTCGGTCTCAGTGACTTCCCCTCTCCCTCCGCCGACTACAGCTTCTTTCTCTACCAGTGGGCCTTCGCCATCGCCGCAGCCGGCATAACTAGCGGCTCCATCGCCGAGAGAACGCAGTTCGTCGCTTATCTTATATACTCCTCGTTCCTAACCGGCTTCGTCTACCCTATCGTCTCTCATTGGTTTTGGTCGTCTGATGGGTGGGCCAGCCCCACCAGAACCAGTGGAAGCCTCCTCTTTGGATCTGGCGTAATTGATTTTGCCGGATCTGGAGTTGTCCACATGGTCGGCGGAGTTGCCGGCCTATGGGGAGCCTTGATTGAAGGACCACGCATAGGTCGCTTTGACAGAAGTGGCCGTTCGGTGGCCCTTCGAGGTCACAGCGCTTCCCTAGTTGTGCTAGGTTCGTTTATGTTATGGTTCGGTTGGTACGGTTTCAATCCAGGCTCCTTTCTAACCATTGCGAAAAGCTACGGTAAAAGTAGCGTGTATTATGGACAATGGAGCGCGATAGGGAGGACAGCTGTCACTACTACATTGGCTGGTTGCACTGCAGCCCTAACTACTTTGTTCAGTAAACGGTTATTGGTTGGACACTGGAACGTGATCGATGTGTGTAACGGTTTGCTTGCTGGTTTCGCTGCCATAACGTCTGGGTGCTCTGTCGTTGAGCCATGGGCGGCAATTGTGTGCGGCTTTGTTGCGGCGTGGGTACTCATTGGGCTCAACATGTTGGCGGCAAAGGTGAAGTTTGATGACCCATTGGAGGCGACGCAGCTCCACGGAGGGTGTGGTGCATGGGGAGTGCTATTCACGGGGTTATTTGCAACTAAGAAATACGTGGCAGAGGTGTACGGATCCGGGAGGCCTTACGGGCTGTTGATGGGCGGCGGAGGGAAGCTGTTGGCTGCGCAGGTGATCGAAATTCTAGTAGTTAGCGGGTGGGTGACGGCAACGATGCTGCCGCTGTTTTACGGACTTCAAAAGATGAGTCTGTTGAGGATATCGAGGGAAGATGAGACGGCGGGTATGGATTTGACGAGACACGGTGGGTTTGCTTATGCGTATCATGATGAAGATGATGGGTTTGCAAAGCCCGCCATGTATATGATGGGCAGGATTGAGCCCTCTCCTCAAGCCAATCCACTGTGA 1494 0.5482 MASQSCAAALLGGLANVNTTAANFICGQLDAINQKLTDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGGPSNGFIGRHFFGLSDFPSPSADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASPTRTSGSLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFMLWFGWYGFNPGSFLTIAKSYGKSSVYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLAGFAAITSGCSVVEPWAAIVCGFVAAWVLIGLNMLAAKVKFDDPLEATQLHGGCGAWGVLFTGLFATKKYVAEVYGSGRPYGLLMGGGGKLLAAQVIEILVVSGWVTATMLPLFYGLQKMSLLRISREDETAGMDLTRHGGFAYAYHDEDDGFAKPAMYMMGRIEPSPQANPL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0953 497 Pfam Ammonium Transporter Family 47 468 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo15g0953 497 SUPERFAMILY Ammonium transporter 41 449 - -
Amo15g0953 497 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo15g0953 497 PANTHER AMMONIUM TRANSPORTER 6 491 - -
Amo15g0953 497 PANTHER AMMONIUM TRANSPORTER 6 491 - -
Amo15g0953 497 Gene3D Ammonium transporter AmtB like domains 21 483 IPR029020 -
Amo15g0953 497 TIGRFAM amt: ammonium transporter 44 468 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0953 Amo-Chr15 69817028 69820441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0953 23 495 Inorganic Solute Cotransporters AT1G64780 80.672 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0953 K03320 K07573 gmx:100797209 830.091