Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0914 ATGAACCAGCAGGACGAGAAAGCCACCATGGATCTTGTTCCACCCTCTGAGCACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTGCTTGCGAGGCTGCTGGATACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCGTTTCTGAGCACCAGGCCCCCTCCACCTCCAGCCCCTTTCTCTCACACCCATCAAACCACCACCATTGATCACACTCTCACTCTCCAGGGTTTCTATGGTGATTCGAAGAAGGGGCAAGGATCATCTTCATCGTCCTCACCAACTACATCAAACGAATCAGTCTCCCCTAAAGCAGCACCTTTTGTTGTCAAACCACCTGAGAAGAAGCACCGTCTTCCATCTGCATACAACCGTTTCATGAAAGAGGAGATTCAGCGCATCAAAGCAGCCAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCCAAAAATTGGGCAAGGTTTATTCCAAATTCGCCTGCAAGCTCAGTTGCTGCAAGAATGAGAGAGTGGTGGCAAAAGGAGATATTCGGAGAGAAAAGCAACCTTTTGGCAAGGCAAAAGCGCTAG 582 0.5034 MNQQDEKATMDLVPPSEHLCYVRCNFCNTVLARLLDTVTVKCGHCSNLSFLSTRPPPPPAPFSHTHQTTTIDHTLTLQGFYGDSKKGQGSSSSSSPTTSNESVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPASSVAARMREWWQKEIFGEKSNLLARQKR* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0914 193 PANTHER PROTEIN CRABS CLAW 8 170 - -
Amo15g0914 193 MobiDBLite consensus disorder prediction 79 118 - -
Amo15g0914 193 SUPERFAMILY HMG-box 104 158 IPR036910 -
Amo15g0914 193 PANTHER PROTEIN YABBY 6-RELATED 8 170 IPR006780 GO:0007275
Amo15g0914 193 Gene3D High mobility group box domain 111 185 IPR036910 -
Amo15g0914 193 MobiDBLite consensus disorder prediction 79 105 - -
Amo15g0914 193 Pfam YABBY protein 15 159 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0914 Amo-Chr15 65630416 65632783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0914 5 184 C2C2-YABBY Transcription Factor Family AT1G69180 56.614 2.25e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Amo15g0914 YABBY 6.3e-50 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0914 K25796 - gmx:100819079 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0914 15 65630416 65632783 Amo15g0914 15 65630416 65632783 ECH