Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0913 ATGGTGCTTTACTGCCATCTTATTCATGACTCTTTTCTTTCGACCAATGGAAATTTATGTGGTGATAAGGACAAGTTAACACTTCATGGTCTTGTTCAGAGCTGCAGAGTTGAACAAGTTGCTTGTGGAGTGCAAATTTCCTTCAATATGTATACATTCTGGAATGTCACAGAAAGAAAGGTTGAAACGATACAAAGGCTTCAAAGAAGGGGGCAAAGGATACTTATGACAACAGAGTTAGTAGAAAGGGGTATCGACATAGAATGGGTTAACATAGTTATCAACTATGACATACCTGATTCTGCTGACAATTACTTACGCACAGGGAATAAATCTGCAGTTGCAAAATACTATACCAAAAGAGTTTTACCTTGA 375 0.376 MVLYCHLIHDSFLSTNGNLCGDKDKLTLHGLVQSCRVEQVACGVQISFNMYTFWNVTERKVETIQRLQRRGQRILMTTELVERGIDIEWVNIVINYDIPDSADNYLRTGNKSAVAKYYTKRVLP* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0913 124 Pfam Helicase conserved C-terminal domain 59 106 IPR001650 -
Amo15g0913 124 Gene3D - 19 113 IPR027417 -
Amo15g0913 124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 111 IPR027417 -
Amo15g0913 124 PANTHER BNAC04G43400D PROTEIN 66 108 - -
Amo15g0913 124 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 66 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0913 Amo-Chr15 65616592 65618416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0913 58 109 Eukaryotic Initiation Factors Gene Family AT5G11170 56.604 5.45e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0913 K12812 - gmx:100799082 58.5362