Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0900 ATGTTTGCTCTCTTGTCCTGTTTGAAGCGTCCCCCGCGTGTTCAGTCTCACTGCATCCCGCGAGTGCTGGAGGGCCACCACGTGCTCGGCATCGATGAAACTGGCAGCGGCAAGACCGCCGCTTTCGCCCTCCCGGTCCTCCACCGCCTGTCGGAGCACCCGTTCGGTGTGTTCGCGTTGGTGGTGACGCCCACTAGGGAACTGGCATTCCAGCTAGCAGAGCAGTTCCGCTTAACTGAGATAATTAGTAATTCCAAACAGCTATCTGAATGGCATCCAAAGAGCCACTGGTGA 294 0.5748 MFALLSCLKRPPRVQSHCIPRVLEGHHVLGIDETGSGKTAAFALPVLHRLSEHPFGVFALVVTPTRELAFQLAEQFRLTEIISNSKQLSEWHPKSHW* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0900 97 Gene3D - 5 90 IPR027417 -
Amo15g0900 97 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 8 78 - -
Amo15g0900 97 Pfam DEAD/DEAH box helicase 13 77 IPR011545 GO:0003676|GO:0005524
Amo15g0900 97 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 19 97 IPR014001 -
Amo15g0900 97 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 78 IPR027417 -
Amo15g0900 97 PANTHER RNA HELICASE 8 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0900 Amo-Chr15 64474762 64475055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0900 6 86 Eukaryotic Initiation Factors Gene Family AT5G11200 37.805 2.90e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0900 K14778 - gmx:100798597 127.487