LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo15g0874	ATGTCTGATGATATGCTTGTGCATTTCTCTTCCAATTCCTCCAACCAATCTGACCAGTCCCTTCCAACGAAGATTGCGAAGCTGGAAGCTCGAATGGTGGGCAAGGCTTCCTCCACCGCTGCTCAGCAGCCAGGTTGGTCCTCTGCCCCTTCAACTGGGAAATTTGGAGGAGCTGCTGAGGATTTAGCTGAGGCATGTAGTTCCAGTGATTCTGATGATGATAATGGTGAAGAATTCTTAATACAAGCCAACACGCAGAAGCGGCTAAAACTTCAAGAAGATGACAACTCTAATGTTTTTGAACATCTCGAGGTTATGACTGATGGAAGACAAACTAGTTCAGAGCCCGTCGAGATAAAAATAAGTAACGATGTGAATAGAAAGAAACATGGTCGTGGACGAGGCAATTCTGGTTCAGGAAGGGGCCGGGGTTCCAGATCTAATGATCAGACCAGAACACAAATACCTCCTCCAACTGCTTTGACCTCAAATGGCCAGACCGATTTATATCATAAGGATGGAAGACTCAAAGATCAACTTCGTAATGATAATTTTTCTTCTTTAGAGGAGGAGGTTGCATCTTTACGGGCAAAGGTTGTAGCATTGGAGGAGGACTTGCGTAAATCAAAACAGGAGACCTCTGAATATCAGAATCTTTGTCGGCAGTTGGAAAAGGAACTTAAGGACCTGACAGATCAAGAACAACAAATGAAGCCAAAGCGGACAAAAATAATATCTGATTTGCTGATATCGGTTTCAAAGGCTGAGAGACAAGAGGCCAGGCTGAAAGTGCGGCAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCTTATCTGAAACGTGGGAAGATGGTCAAGCATTAAAGGATCTGAATGCCCAGCTTAGACAACTAATAGAAACAAAGGAGGCAATTGAACGTCAGCGCAAATTATTCAAGAAAAAACAATCTGATAAGGGCGATACAACTGATGCAGAGGCTGGATTATCAGAAGATGTTCTCATTCATGATGAAATTTATAAATCTCGACTGGCTAGCATCAAACGGGAGGAAGAAGTTATTTTGCGTGAGAGGGATCGCTATGAACTTGAGAAGGGAAGGTTGATTCGTGAAATGAAACGTATAAGGGATGAAGATGGTTCACGGTTCAACAACTTTCAGATTCTAAACCATCGATATGCCCTTCTAAACCTTCTCGGAAAGGGAGGGTTCAGTGAGGTTTACAAGGCTTTTGATTTGGTAGAGCATAGATATGTTGCCTGCAAGCTTCACGGTTTAAATCCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATGCGGCATGCAATTCGGGAGTATAATATTCACAAGTCCCTTGTGCATCATCACATTGTTCGTTTATGGGACATATTTGAGATTGACCAAAATACGTTCTGTACTGTTCTGGAATATTGTAGTGGGAAAGATCTTGATGCTGTCCTTAAAGCAACACCTATATTGCCAGAGAAGGAGGCTAGAGTCATTCTGGTTCAGATTTTTCAAGGCCTTATATACATGAATAAAAGAACACAGAAAATTATCCATTATGATTTAAAGCCAGGAAATGTTCTGTTTGATGAGCTTGGTATTGCAAAAGTGACTGATTTTGGTCTCAGCAAGATAGTGGAGGATGATGTTGGATCCCAGGGTATGGAACTTACATCCCAGGGAGCTGGAACATACTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACGCCTTATATTTCATCGAAGGTTGATGTCTGGTCTGCTGGCATTTTGTTCTATCAAATGCTCTTCGGTAGACGTCCTTTCGGGCATGACCAAACTCAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCGCGCAAGGTTGACTTTCCTACTAGGCCTGCTGTTTCTAATGAGGCAAAGGATTTCATTCGTCGGTGTCTCACGTATAACCAGATCGAGAGACCAGATGTATTAACAATTGCTCAAGATCCATATCTCACATACTCAAAGAAGTAA	2031	0.4234	MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASSTAAQQPGWSSAPSTGKFGGAAEDLAEACSSSDSDDDNGEEFLIQANTQKRLKLQEDDNSNVFEHLEVMTDGRQTSSEPVEIKISNDVNRKKHGRGRGNSGSGRGRGSRSNDQTRTQIPPPTALTSNGQTDLYHKDGRLKDQLRNDNFSSLEEEVASLRAKVVALEEDLRKSKQETSEYQNLCRQLEKELKDLTDQEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVLSETWEDGQALKDLNAQLRQLIETKEAIERQRKLFKKKQSDKGDTTDAEAGLSEDVLIHDEIYKSRLASIKREEEVILRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNPQWSEEKKQSYMRHAIREYNIHKSLVHHHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEKEARVILVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPYISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVDFPTRPAVSNEAKDFIRRCLTYNQIERPDVLTIAQDPYLTYSKK*	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo15g0874	676	Coils	Coil	349	383	-	-
	Amo15g0874	676	PANTHER	BNAC09G36930D PROTEIN	1	676	-	-
	Amo15g0874	676	MobiDBLite	consensus disorder prediction	105	170	-	-
	Amo15g0874	676	SMART	serkin_6	398	671	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo15g0874	676	Gene3D	Transferase(Phosphotransferase) domain 1	389	676	-	-
	Amo15g0874	676	MobiDBLite	consensus disorder prediction	36	50	-	-
	Amo15g0874	676	SUPERFAMILY	Protein kinase-like (PK-like)	390	672	IPR011009	-
	Amo15g0874	676	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	524	536	IPR008271	GO:0004672\|GO:0006468
	Amo15g0874	676	Pfam	Protein kinase domain	399	671	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo15g0874	676	Coils	Coil	185	236	-	-
	Amo15g0874	676	MobiDBLite	consensus disorder prediction	1	23	-	-
	Amo15g0874	676	ProSitePatterns	Protein kinases ATP-binding region signature.	404	427	IPR017441	GO:0005524
	Amo15g0874	676	MobiDBLite	consensus disorder prediction	1	76	-	-
	Amo15g0874	676	CDD	STKc_TLK	397	670	-	-
	Amo15g0874	676	PANTHER	MIXED LINEAGE PROTEIN KINASE	1	676	-	-
	Amo15g0874	676	ProSiteProfiles	Protein kinase domain profile.	398	671	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo15g0874	676	Coils	Coil	293	320	-	-
	Amo15g0874	676	MobiDBLite	consensus disorder prediction	140	169	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo15g0874	Amo-Chr15	63483862	63490822	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo15g0874	381	676	MAP Kinase Kinase Kinase	AT3G13530	27.667	6.74e-28	118

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TLK	Amo15g0874		Pkinase	9.1e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo15g0874	K08864		-	gmx:100805168	1129.39