Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0851 ATGCTCAACACGCAAGTTCCTTCTTGGAACTATCCTCTGTTAATGGCTACATGGAAGGTTGCCCCTGCTCTGGCAGCTGGTTGTGCTGCGATATTGAAGCCTTCCGAATTGGCATCTGTGACATGTTTGGAGTTGGTTGACATATGCAAAGAATCTAAGATGAAACGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAGAAAAAAATCTCAAGATGTTCATGGCCAAAAATTGAAAGCACTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAGGTCCAATTGCAGTATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCAAGAAAAGGAGTTACTTCAGGACAGGGAAGCTTTCGGAAGGTTTATAAAGGAGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGAGGAGGCAGAATATATTCGCAAGCTCAGGAAACTTTTCGAGGTTGCCTATCGTCTTCATGAACTCAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTGGGAACAGCCCAAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGTGAAGGCAGCTAATGTCACTTRTGTAGCTATATGTCACTAG 720 0.4222 MLNTQVPSWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELVDICKESKMKRIGIDTEALKEHFGKKIMELEEEKRKKSQDVHGQKLKALEAQILDLKKKQENQVQLQYKMKQEAEQFRQWKASQEKELLQDREAFGRFIKEFYPMAQKLLLKEEAEYIRKLRKLFEVAYRLHELKPGEAVLDWPTRKKVALGTAQGLEYLHEQCNPKIIHRDVKAANVLLDVKAANVTXVAICH* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0851 239 ProSiteProfiles Protein kinase domain profile. 18 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0851 239 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 63 IPR016162 GO:0016491
Amo15g0851 239 Pfam Aldehyde dehydrogenase family 6 52 IPR015590 GO:0016491
Amo15g0851 239 Pfam Protein kinase domain 177 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0851 239 PANTHER LRR RECEPTOR KINASE SERK2 171 228 - -
Amo15g0851 239 Coils Coil 65 111 - -
Amo15g0851 239 Gene3D Transferase(Phosphotransferase) domain 1 171 237 - -
Amo15g0851 239 SUPERFAMILY ALDH-like 7 52 IPR016161 GO:0016491
Amo15g0851 239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Amo15g0851 239 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 171 228 - -
Amo15g0851 239 SUPERFAMILY Protein kinase-like (PK-like) 176 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0851 Amo-Chr15 60412211 60415553 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0851 170 226 Receptor kinase-like Gene Family AT5G65240 75.439 2.28e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo15g0851 Pkinase 8.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0851 - - ahf:112750268 185.652