Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0849 ATGGCTACATGGAAGGTTGCCCCTGCTCTGGCAGCTGGTTGTGCTGCGATATTGAAGCCTTCCGAATTGGCATCTGTGACATGTTTGGAGTTGGCTGACATATGCAAAGAAGTGGGCCTTCCTCCGAGTTCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAGAAAAGTGCAGAAATCTCAAGATGTTCATGGCCAAAAATTGAAAGCACTGGAAGCACAGGTCCAATTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTCGGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGAGGAGGCAGAATATATTCGCAAGCTCATGAAACTTTTCGAGGTTGCCTATCATCTTTGAGAACTGTATATTGTTGTTTATGCTGGCTTCTAAAACTTGGGTCATTTTCTTATGAAGAACTCAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTGGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGTGAAGGCAGCTAATGTCATTTCTGATTGCATTGCTCGAACAAACAGGAATTGGAAAGAATGCCAGCCACATTTGTTTCTTCAATTTCAATCACTTCTCGATTATTTGATTCTTTTTCATGAGGTTTTTTTTCTACAAGGAAGATCATTGTTATTTTGTTGA 912 0.4112 MATWKVAPALAAGCAAILKPSELASVTCLELADICKEVGLPPSSKMKRIGIDTEALKEHFGKKIMELEEEKRKVQKSQDVHGQKLKALEAQVQLQHKMKQEAEQFRQWKASREKELLQLKRFAWRELQIATDNFSERNVLGQGGFRKVYKGVLPDGTKIAVKRGGRIYSQAHETFRGCLSSLRTVYCCLCWLLKLGSFSYEELKPGEAVLDWPTRKKVALGTARGLEYLHEQCNPKIIHRDVKAANVLLDVKAANVISDCIARTNRNWKECQPHLFLQFQSLLDYLILFHEVFFLQGRSLLFC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0849 303 Gene3D Transferase(Phosphotransferase) domain 1 199 270 - -
Amo15g0849 303 Pfam Aldehyde dehydrogenase family 1 42 IPR015590 GO:0016491
Amo15g0849 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Amo15g0849 303 Coils Coil 57 77 - -
Amo15g0849 303 Pfam Protein tyrosine and serine/threonine kinase 207 259 IPR001245 GO:0004672|GO:0006468
Amo15g0849 303 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 115 259 - -
Amo15g0849 303 ProSiteProfiles Protein kinase domain profile. 134 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0849 303 SUPERFAMILY Protein kinase-like (PK-like) 117 259 IPR011009 -
Amo15g0849 303 PANTHER EXPRESSED PROTEIN 115 259 - -
Amo15g0849 303 SUPERFAMILY ALDH-like 1 43 IPR016161 GO:0016491
Amo15g0849 303 Gene3D Phosphorylase Kinase; domain 1 104 188 - -
Amo15g0849 303 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 60 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0849 Amo-Chr15 60244209 60248813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0849 118 259 Receptor kinase-like Gene Family AT5G10290 54.321 1.91e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo15g0849 PK_Tyr_Ser-Thr 9.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0849 - - ahf:112750268 305.834