Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0842 ATGGAGAATAATAACAGTGGGAGAAAGGAGGCAATAGAACAAGAGCTAATAAGAGGGCGTGACGTGGCAAAAGAGCTACTCGAAGTACTTATTATTCATAAATCCAATAGAAATGAAGAAGAAATTGAAAGGTCAATGGTGATGATGCCTTTTATTGAAGATGTTGTGCGCAAGATTCTCATATCATTCACAAACACCCTCTTGCTATTCAACAGCGACACCCAACATAACCGCTCTGATGAGGAGGGTAATCATATTCATCAAGGTTGCAAGAAAAGTAAGAGACCACCAACCCTATGTTACAAGAGAAAATCATTTGCACCAACTTGGAGTATCGATAATGCGATTCTATCAGAAGATGGGCTTGAATGGAGAAAGTATGGACAGAAAAAGACAAAGGACTGCAGATATATCAGGAGCTACTACAAGTGCAGTTACAAGAATGAAGAAGATTGCAAAGCCATCAAACGTGTTCAAAGAATCCAAGAGGATCCTCCATTATACCGTACAACCTATTATGGCCATCACACTTGCAAAAGCTCTTTTGTCAATTACCCTCACATGAAACTAGAATCTGCTCCTTCTTTAGAAGAGTCTTCTAAATTACTAAGTTTTAATAATAATTATTATAACAATAATACCCTCCAAAGCAAAGAGATGAAACACCTTTCATCATCAATTTCTTCTACAAAACAAGAGCCTGTGGAAGTGATTATTCCTAATGATGACCATAATCAAATCCATCTTCTAAGTGACTGTGAGCTTGATTTCAATTATTCATCCACCGAATCTGTTGCATTCGACATTTTCATGGGAATGTTTAAATTTTGA 831 0.3694 MENNNSGRKEAIEQELIRGRDVAKELLEVLIIHKSNRNEEEIERSMVMMPFIEDVVRKILISFTNTLLLFNSDTQHNRSDEEGNHIHQGCKKSKRPPTLCYKRKSFAPTWSIDNAILSEDGLEWRKYGQKKTKDCRYIRSYYKCSYKNEEDCKAIKRVQRIQEDPPLYRTTYYGHHTCKSSFVNYPHMKLESAPSLEESSKLLSFNNNYYNNNTLQSKEMKHLSSSISSTKQEPVEVIIPNDDHNQIHLLSDCELDFNYSSTESVAFDIFMGMFKF* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0842 276 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 268 - -
Amo15g0842 276 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo15g0842 276 Pfam WRKY DNA -binding domain 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo15g0842 276 Gene3D WRKY domain 109 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo15g0842 276 SUPERFAMILY WRKY DNA-binding domain 112 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo15g0842 276 ProSiteProfiles WRKY domain profile. 113 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo15g0842 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 268 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0842 Amo-Chr15 59475442 59482856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0842 3 180 WRKY Transcription Factor Family AT3G56400 29.592 1.77e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo15g0842 WRKY 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0842 - - aip:110265453 517.309