LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo15g0835	AGAAAACCCTCCAAGTCCAAAACACGAAGAAAACTCTTTCAGAAAACCCTACCTCCTGCACCGCACGAAGATCGTGAAGCCTCACTGTCGCGAAGATCATCGCACCCCAAGTTCCTCAAGTTGAATCCTCTTGCTTTAATTCCCGTTCTGGTGGATGGCAATTTTGTTCTTGCTGAATATTTAGCCATTATTATGTATTTAGACGATAAGTATCCTCAATACCCTTTGCTGCCTCATGACATTCCCAAAAGAGCACTCAATTTTCAGGTTGCACATATTGTTTTGCAGAATAACGCCATTGAGAAAAAGGTTGGCCCTCATGAAAAACTTCCTTGGGCACAAAGTGTCATTAGAAAGGGCTTCACAGCACTTGAAAAGCTACTGAAAGATCACGCAGGGAGATATGCCAATGGAGATGAAATTTTCCTATGCAAGATCACTTGGAGGATTTTAATTGGTGTTGCCGTGGAATATGTAATCCGAGAGCCCATTCCAGAGGTTGATAATTCTCACTTTACTCTTTGA	525	0.421	RKPSKSKTRRKLFQKTLPPAPHEDREASLSRRSSHPKFLKLNPLALIPVLVDGNFVLAEYLAIIMYLDDKYPQYPLLPHDIPKRALNFQVAHIVLQNNAIEKKVGPHEKLPWAQSVIRKGFTALEKLLKDHAGRYANGDEIFLCKITWRILIGVAVEYVIREPIPEVDNSHFTL*	175

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo15g0835	174	Gene3D	-	82	167	-	-
	Amo15g0835	174	SUPERFAMILY	GST C-terminal domain-like	75	141	IPR036282	-
	Amo15g0835	174	MobiDBLite	consensus disorder prediction	16	32	-	-
	Amo15g0835	174	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	1	75	IPR004045	-
	Amo15g0835	174	MobiDBLite	consensus disorder prediction	1	32	-	-
	Amo15g0835	174	PANTHER	S-CRYSTALLIN-RELATED	29	147	-	-
	Amo15g0835	174	PANTHER	MALEYLACETOACETATE ISOMERASE	29	147	-	-
	Amo15g0835	174	Gene3D	Glutaredoxin	8	81	-	-
	Amo15g0835	174	Pfam	Glutathione S-transferase, N-terminal domain	29	73	IPR004045	-
	Amo15g0835	174	SUPERFAMILY	Thioredoxin-like	22	84	IPR036249	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo15g0835	Amo-Chr15	57952945	57955703	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo15g0835	29	167	Glutathione S-transferase Gene Family	AT2G02380	44.371	1.81e-34	119

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo15g0835	K01800		-	gmx:547590	152.525

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