Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0823 ATGCAAAACTCGAGGCAACAACAACCCTCTTCCTTCTTCTTCATTTCTTCTTATTCATTCTTTTGTTTCATTCTTCTCTTTCACACTACTTTTCTCTATGGTATTGCATTCTGTTCTACGAACAGTAATAACAACGAAGCTTCTGCTCTATTTTCTTGGCTCCATAGTTCTTCTTCACCACCACCATTGTTATTGTCCAACTGGAACATCCATGACTCAAACCCATGCAACTGGACCTGCATAACATGTTCTACACTCGGTTTTGTAACTGAGATCACCATAGAATCCACCCCTCTTGAGCTTCCACTACCTTCAAACCTTTCTTCATTCAAGTTCCTTCAGAAGCTTGTCATCTCTGATTCAAATCTCACTGGACAAATCCCTCAAGACATTGGTGACTGCACTTCACTCACTGTTCTTGACTTAAGCTCTAACAACCTTGTTGGTTCAATACCTTCCTCCATTAGAAAGCTTCACAATCTTGTCAACTTGTCCTTGAACTCTAACCAGCTTTCGGGGAAGATCCCAGTCGAGTTAAGCAACTGCATTGGACTAAAGAGTCTTCTCCTTTTTGATAACCAGCTTAGTGGGGTTATCCCAAAGGAGCTTGGAAAGTTGTCGAATCTTGAGGTTCTTAGAGCCGGAGGGAACAAGGACATAGTTGGTAAGATACCTGAACAGTTTGGAGAATGCATCAATTTAACAGTGTTGGGGCTAGCTGATACAAGAATCTCAGGCTCATTGCCAGTTTCATTGGGAAAACTAAGCAAGCTTCAAACTCTGTCAATTTACACCACAATGCTCTCAGGTGAGATTCCAAGAGAGTTAGGTAACTGTTCTGAGCTTGTTGATTTGTTCCTCTATGAGAATAGCCTCTCAGGTTCCATTCCACCTGAGCTTGGAAAGCTTCAAAATCTGCAACAGTTGTTTCTATGGCAGAATAGTCTTGTTGGTGCTATACCCGAAGACATTGGAAACTGCACAAGTTTGAGAAAAATTGACTTCTCTTTGAATTCTATATCTGGATCCATTCCTCTGTCTTTAGGAAATCTTTTGAATCTTGAAGAGTTTATGATTAGTGACAACAACGTGTCTGGCTCGATACCTTCGTCGCTCTCGAATGCAAAGAACCTTCAGCAGTTGCAAGTTGATACAAACCAGCTTTCAGGTTTGATTCCACCCGAGCTAGGCCAGTTGTCGAACCTAATGGTGTTTTTCGCTTGGCAGAACCAGCTTGAAGGTAGCATTCCATCAAGTTTAGGAAACTGCAGCACCCTGCAGGCACTGGACTTGTCTCGAAACACGCTAAACGGAAGCGTTCCGGCAAGCCTATTTTGCCTCCAGAACTTAACAAAGCTGCTTCTCATCTCAAACGACTTATCAGGATCTATACCTTCAGAGATAGGTAGCTGCAGCTCTCTTGTAAGGTTGAGGCTTGGAAACAACAGAATCACTGGTAGTATTCCCAAGACCATAGGCAGCCTCAAGAGCTTAAACTTTCTTGATCTCTCCGGGAACCAGCTTTCAGGGCCGGTTCCTGAAGAGATAGTAGGCTGCTCAGAGCTGCAAATGATAGACTTGAGTGGCAACAACTTAGAAGGACCATTGCAAAATTCTCTGTCAACACTTTATTCCCTTCAAGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCAGTGCCTGCGAGTTTGGGCCACCTTGTATCTCTAAGCAAGCTTATCTTAGGAAAGAACTTGCTTTCCGGACTGATTCCAGCGTCGCTGAGCCTATGTTCAAATCTGCAATTGCTTGATCTTAGCAGTAATCAGCTCACCGGTAGCATACCAGCCGAGCTAGTCCGGATGGAGTCACTAGAAATCGCTCTCAATCTGAGCTGCAATTTTCTCAGTGGGAAAATCCCGGCTCAGATATCTGCACTTAGCAAGCTTTCCATGTTAGACCTTTCACATAACCAGTTGGAAGGGAATTTGCAGCCTTTGGAAGAGTTAGACAATCTTGTCTCCCTTAATGTTTCGTACAACAAGTTCTCCGGTTATCTTCCGGATAACAAGCTTTTCAGGCAGTTATCGCCGAAAGACCTCGCTGGAAACCAAGGCCTGTGCACATCAGGTCAGGACTACTGCTTTGTGAAAGACTCTGGCACGGCCTTGAATGCGAACGAGGCAAAGAAGTCTCGAAGGATTAAAGTGGCTATTTGTTTACTCATTGCTCTAACTGTGATAATGATTGTTATGGGAATAACTGCTGTAATAAAAGCCAGAAGAACAATTAGAGATGATGATTCAGAGTTAGGAGAATCATGGTCATGGCAATTCATACCATTCCAGAAGCTGAATTTCACGGTTGAGCAAGTACTAAGGCGTTTGGTTGACAGGAATATAATCGGAAAAGGATGCTCCGGCGTAGTGTATCGTGCCGAGATGGACAGCGGAGAAGTGATTGCAGTGAAGAAGCTGTGGCCTACAACAGATGCAGGGGAGGTGTTAGATGAAAAGACAGGAGTTCGTGATTCTTTCTCGGCCGAGGTGAGGACTCTCGGGTCGATCCGCCACAAGAACATTGTGAGGTTCTTGGGATGCTGCTGGAACAGAAAAGCCAGATTGCTTATTTTCGATTACATGCCGAATGGGAGCTTAAGCAGTTTGCTCCATGAGAGGACTGGGACTTGTTTGGAATGGGAATTGAGGTATAGAATCTTGTTGGGTGCTGCTCAAGGAATTGCATATCTTCATCATGATTGTGTTCCTCCTATAGTTCATAGAGATATCAAAGCCAATAACATCCTCATTGGCATTCAATTTGAGCCTTATATTGCTGATTTTGGCTTGGCTAAGCTAGTTGACGACGGCGATTTCGGCAGATCTTCCAATACCGTTGCCGGTTCTTATGGATACATTGCTCCAGAATATGGCTACATGATGAAGATCACAGAGAAAAGTGATGTGTATAGCTACGGAATAGTTTTGTTAGAAGTCTTGACAGGAAAGCAACCGATCGATCCAACAATCACGGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAAGGGCTTGATGTTCTTGATCCTAGGTTACTCTCTAGGCCAGAATCAGAAATAGAGGAAATGATGCAAGCTTTGGGAATAGCCATGTTATGTGTAAATCCGTCCCCAGAAGAAAGGCCGACGATGAGAGATATCGCCGCGATGCTCAAGGAGATAAGGCAAGAAAGGGAGGAGTCTGCGAAATTCGACGCACTTCTAAAGGATTCGCCTGCGAATGAGGGCAATAAATGTTCTTCTGGTGGAGTTATGGCAGCATCTTCGACGGTGCCAGTGATGCAACGTTTGAATTCAAAGATTAATAATAACACGAGCTTCTCTGTGTCTTAA 3375 0.4382 MQNSRQQQPSSFFFISSYSFFCFILLFHTTFLYGIAFCSTNSNNNEASALFSWLHSSSSPPPLLLSNWNIHDSNPCNWTCITCSTLGFVTEITIESTPLELPLPSNLSSFKFLQKLVISDSNLTGQIPQDIGDCTSLTVLDLSSNNLVGSIPSSIRKLHNLVNLSLNSNQLSGKIPVELSNCIGLKSLLLFDNQLSGVIPKELGKLSNLEVLRAGGNKDIVGKIPEQFGECINLTVLGLADTRISGSLPVSLGKLSKLQTLSIYTTMLSGEIPRELGNCSELVDLFLYENSLSGSIPPELGKLQNLQQLFLWQNSLVGAIPEDIGNCTSLRKIDFSLNSISGSIPLSLGNLLNLEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLMVFFAWQNQLEGSIPSSLGNCSTLQALDLSRNTLNGSVPASLFCLQNLTKLLLISNDLSGSIPSEIGSCSSLVRLRLGNNRITGSIPKTIGSLKSLNFLDLSGNQLSGPVPEEIVGCSELQMIDLSGNNLEGPLQNSLSTLYSLQVLDASSNKFSGPVPASLGHLVSLSKLILGKNLLSGLIPASLSLCSNLQLLDLSSNQLTGSIPAELVRMESLEIALNLSCNFLSGKIPAQISALSKLSMLDLSHNQLEGNLQPLEELDNLVSLNVSYNKFSGYLPDNKLFRQLSPKDLAGNQGLCTSGQDYCFVKDSGTALNANEAKKSRRIKVAICLLIALTVIMIVMGITAVIKARRTIRDDDSELGESWSWQFIPFQKLNFTVEQVLRRLVDRNIIGKGCSGVVYRAEMDSGEVIAVKKLWPTTDAGEVLDEKTGVRDSFSAEVRTLGSIRHKNIVRFLGCCWNRKARLLIFDYMPNGSLSSLLHERTGTCLEWELRYRILLGAAQGIAYLHHDCVPPIVHRDIKANNILIGIQFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTITDGLHVVDWVRQKKGLDVLDPRLLSRPESEIEEMMQALGIAMLCVNPSPEERPTMRDIAAMLKEIRQEREESAKFDALLKDSPANEGNKCSSGGVMAASSTVPVMQRLNSKINNNTSFSVS* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0823 1124 SMART LRR_typ_2 158 182 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 567 590 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 303 327 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 447 471 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 351 375 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 591 615 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 495 519 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 543 566 IPR003591 -
Amo15g0823 1124 SMART LRR_typ_2 640 670 IPR003591 -
Amo15g0823 1124 Pfam Leucine rich repeat N-terminal domain 43 84 IPR013210 -
Amo15g0823 1124 SMART serkin_6 789 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0823 1124 ProSitePatterns Protein kinases ATP-binding region signature. 795 818 IPR017441 GO:0005524
Amo15g0823 1124 Gene3D Ribonuclease Inhibitor 42 245 IPR032675 -
Amo15g0823 1124 Gene3D Phosphorylase Kinase; domain 1 773 873 - -
Amo15g0823 1124 Gene3D Ribonuclease Inhibitor 536 620 IPR032675 -
Amo15g0823 1124 Gene3D Ribonuclease Inhibitor 621 708 IPR032675 -
Amo15g0823 1124 SUPERFAMILY L domain-like 58 404 - -
Amo15g0823 1124 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 22 1123 - -
Amo15g0823 1124 ProSiteProfiles Protein kinase domain profile. 789 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0823 1124 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 1123 - -
Amo15g0823 1124 PRINTS Leucine-rich repeat signature 594 607 - -
Amo15g0823 1124 PRINTS Leucine-rich repeat signature 640 653 - -
Amo15g0823 1124 Pfam Leucine rich repeat 473 532 IPR001611 GO:0005515
Amo15g0823 1124 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Amo15g0823 1124 SUPERFAMILY Protein kinase-like (PK-like) 766 1065 IPR011009 -
Amo15g0823 1124 SUPERFAMILY RNI-like 368 682 - -
Amo15g0823 1124 Gene3D Ribonuclease Inhibitor 343 438 IPR032675 -
Amo15g0823 1124 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Amo15g0823 1124 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Amo15g0823 1124 Pfam Protein kinase domain 792 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0823 1124 Gene3D Ribonuclease Inhibitor 439 535 IPR032675 -
Amo15g0823 1124 Gene3D Ribonuclease Inhibitor 246 342 IPR032675 -
Amo15g0823 1124 Gene3D Transferase(Phosphotransferase) domain 1 874 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0823 Amo-Chr15 56063632 56067588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0823 65 1093 Receptor kinase-like Gene Family AT5G56040 49.042 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo15g0823 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0823 - - gmx:100818541 1694.48