Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0806 ATGAGTTACGCGAATGGCTCGCCGCACCGGCCGCCGCCTCCGGATACTGACTTGGAGGCGGGGCCTCCAACAGCACGCTCCGGCGACTTCGACGACGGCGATGTCTCTGATCCGTTTGACATCACCAGGACTAAGAACGCCTCGATTGAGCGACTCAGACGTTGGAGGCAAGCAGCACTGGTGCTTAATGCTTCTTGTCGATTTCGTTACACCTTGGACTTGAAAAAACAAGAAGAGAAGACACAAATATTGAGAAAGATTAGAGCTCATGCACAAGCCATTAGGGCAGCATATCTTTTCAAAGCAGCCGGGGATGGTCAAGTGATTGAAACCACAAAGCCTCCTGCGGCCTCTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAGTTTCAAGGGAGCATGATACCGTTGCTCTTCAGCAATATGGAGGGGTTGCTGGGATATCAAATTTGTTGAAAACCAATTTAGAGAAGGGGATTCATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAATGATTATCCTCGAAAGAAAGGAAGAAGTTTCTGGATGTTTATGTGGGATGCTTGCAAGGATCTGACTTTGATTATTTTAATGGTAGCTGCAGCGGCTTCATTGGCATTGGGATAA 651 0.4747 MSYANGSPHRPPPPDTDLEAGPPTARSGDFDDGDVSDPFDITRTKNASIERLRRWRQAALVLNASCRFRYTLDLKKQEEKTQILRKIRAHAQAIRAAYLFKAAGDGQVIETTKPPAASAGEFPIGQEQLASVSREHDTVALQQYGGVAGISNLLKTNLEKGIHGDDADLLKRRNAFGSNDYPRKKGRSFWMFMWDACKDLTLIILMVAAAASLALG* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0806 216 Pfam Ca2+-ATPase N terminal autoinhibitory domain 37 79 IPR024750 GO:0005516
Amo15g0806 216 MobiDBLite consensus disorder prediction 1 41 - -
Amo15g0806 216 SUPERFAMILY Calcium ATPase, transmembrane domain M 144 216 IPR023298 -
Amo15g0806 216 Gene3D - 47 102 - -
Amo15g0806 216 SMART Cation_ATPase_N_a_2 143 216 IPR004014 -
Amo15g0806 216 Pfam Cation transporter/ATPase, N-terminus 145 212 IPR004014 -
Amo15g0806 216 PANTHER - 5 216 IPR000528 GO:0006869|GO:0008289
Amo15g0806 216 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 5 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0806 Amo-Chr15 55195964 55212561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0806 9 216 Primary Pumps ATPases AT4G29900 63.462 8.27e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0806 K01537 - gmx:100792945 328.561