Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0763 CAGCATGGTGGAAGCGGGGTGAGCCTGGCGTTCCCTTCTCCTTTGGTATGCAGTCATCATAGCTCACTCTTCTATGCAACAACCATTGATGCTGCTATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTTATGCCATTATTGACAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCGTTTCAAGACAGGACAGCCCTGGAGCTCCATGGCAGTTTGTTAGTTTGTTGTCACTATTTGATCCACCAAGGCATGACAGTACCGAAACCATTCGCAGGGCTCTTAATCTCGGTGTAAATGTCAAGATGATTACAGGTGATCAACTCGCCATTGCTAAGGAGACAGGCCGAAGACTTGGAATGGGAACAAATATGTACCCATCTGCTTCCCTTCTTGGCCAAGACAAAGATGCAAGTATCACCGCACTTCCCGTCGAAGAGTTGATTGAGAAAGCTGATAGATTTACCGGAGTCTTTCCAGTTTTAATGGGTCATCTTTCTTCAATTTTCAATGGTTTGGGAAAATCACTGGCAATTAAGAAAGGGAGGAATTCTGAAAGATGCAATAGAAGAGAAGCGGCGGAAGCAATGGCGAAGGAAGCAAAAAAGAATGAGTTCTTGTTATGTAGCTCAGGTAATATTTATTCACACGGACATGAACAATGA 759 0.4427 QHGGSGVSLAFPSPLVCSHHSSLFYATTIDAAMPTIVGMAPKNQDAIDAAIVGMLADPKEIMNLCNLRDDAKKKVYAIIDKFAERGLRSLAVSRQDSPGAPWQFVSLLSLFDPPRHDSTETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASITALPVEELIEKADRFTGVFPVLMGHLSSIFNGLGKSLAIKKGRNSERCNRREAAEAMAKEAKKNEFLLCSSGNIYSHGHEQ* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0763 252 PRINTS H+-transporting ATPase (proton pump) signature 75 93 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g0763 252 PRINTS H+-transporting ATPase (proton pump) signature 183 199 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo15g0763 252 PANTHER PLASMA MEMBRANE ATPASE 58 192 - -
Amo15g0763 252 Gene3D - 112 191 IPR023214 -
Amo15g0763 252 PRINTS P-type cation-transporting ATPase superfamily signature 106 117 - -
Amo15g0763 252 PRINTS P-type cation-transporting ATPase superfamily signature 128 138 - -
Amo15g0763 252 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 58 117 IPR023299 GO:0000166
Amo15g0763 252 Gene3D - 58 111 IPR023299 GO:0000166
Amo15g0763 252 PANTHER CALCIUM-TRANSPORTING ATPASE 58 192 - -
Amo15g0763 252 SUPERFAMILY HAD-like 104 156 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0763 Amo-Chr15 52420024 52422137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0763 42 191 Primary Pumps ATPases AT2G24520 61.616 3.03e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0763 K01535 - gmx:100806580 249.21