Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0762 GTGAGCCTGGCGTTCCTTTCTCCTTCGGTAAGCAGTCATCATAGCTCGCTCTTCTATGCAACAACCATTGATGCTGCTATTCCTACTATTGTTGGAATGGCACCGAAAAACCAAGATGCCATTAATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGGCAAGGGCTGGAATCAGAGATGTTCACTTTTTACCTTTCAATCCTGTTGACAAGAGAACTTCTCTGACTTACATTGATGCTGATGGAAACTGGCACCGTGCAAGCAAAGGCGCTCCGGAGCAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTTATGCCATTATTGACAAGTTCGCTGAAAGAGGCCTTCGTTCCCTAGCCATTTCAAGACAGGAGACAGGCCGAAGACTTGGAATGGGAACAAATATGTACCCATCTGCTTCCCTTCTTGGCCAAGACAAAGATGCAAGTATCGCCGCACTTCCCGTCGAAGAGTTGATTGAGAAAGCTGATAAATTTGCCGGAGTCTTTCCAGTTTTGATGGGTCATCTTTCTTCAATTTTCAATGGTTTGGGAAAATCACTGGCAATTAAGAAAGGGAGGAATTCTGAAAGATGCAGCGGAAGAGAAGCGGCGGAAGCAATGGCGAAGGAAGCAAAAAAGAATGAGTTCTTGTTATGTAGCTCAGGTAATATTTATTCACACGGACATGAACAATGA 717 0.4407 VSLAFLSPSVSSHHSSLFYATTIDAAIPTIVGMAPKNQDAINAAIVGMLADPKEARAGIRDVHFLPFNPVDKRTSLTYIDADGNWHRASKGAPEQIMNLCNLRDDAKKKVYAIIDKFAERGLRSLAISRQETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADKFAGVFPVLMGHLSSIFNGLGKSLAIKKGRNSERCSGREAAEAMAKEAKKNEFLLCSSGNIYSHGHEQ* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0762 238 Gene3D - 132 177 IPR023214 -
Amo15g0762 238 PANTHER CALCIUM-TRANSPORTING ATPASE 36 131 - -
Amo15g0762 238 PANTHER PLASMA MEMBRANE ATPASE 130 178 - -
Amo15g0762 238 Gene3D - 34 131 IPR023299 GO:0000166
Amo15g0762 238 PANTHER CALCIUM-TRANSPORTING ATPASE 130 178 - -
Amo15g0762 238 PANTHER PLASMA MEMBRANE ATPASE 36 131 - -
Amo15g0762 238 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 38 133 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0762 Amo-Chr15 52387972 52390062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0762 36 177 Primary Pumps ATPases AT2G24520 56.566 1.89e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0762 K01535 - ahf:112801147 268.47