Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0743 ATGCTTGGATGGGGAACGGACGAAGGACTTATAATAAAAATCTTGTCTCATAGAAATTCAGCTCAGCCATCTAGCAGTGGTGAATATGAAACTTCAGGATCCACAGCTGCTAGTGCTTCTGGCCTTTCAGCAATTATGGCAGCAAAATCGATGGAATTCTCTTATCAAAAACTAGCCAAGGCTACAAATAACTTCAGCTCTGATAACAAAATTGGTCAGGGTGGATTCGGAGCTGTCTATTTTGCAGAATTGAGAGGCCAAAAAGCAGCAATTAAGAATATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGATATTGCGTCGAGGGATATCTTTCCTTGTGTATGAATACATTGAAAATGGAAACTTAAGCCAATATTTGCATGGTACAGGGAGAGAACCTTTGGCATGGTCAACAAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGACTTGAATATATACATAAACACACTGTTCCTATTTATATCCACCGTGATGTGAAACCTGCTAACATATTAATATATAAAGACTTCCATGGAAAGCTGCTATTCGGCAAGGTAGGAGAAGTATGCCGATTAATGGATATGAGGCAAGGGATGTCATGGCTCTTTTGCAATGTGCTAAGACATTGCAAGAACAAGTTATCGATGAAGATGGCTCTGTTAAGGACTCTACGGGAACAGCATTGGTGGTCCTTGTCGGACTTGTCGTTGGTTACCACCACTAGTTCCTCAAAGCTTGGAAGAGAGAGTTTCATAGATCTTAACTTCCCTGCCCTAGCCGAAGAAGATGATGCAAGCCAATTTGAGGATTCCGCGATTTCGGATGCAGAGTTTGTGAATCCAACGAAGGTTTTTCTTAGATGA 906 0.4117 MLGWGTDEGLIIKILSHRNSAQPSSSGEYETSGSTAASASGLSAIMAAKSMEFSYQKLAKATNNFSSDNKIGQGGFGAVYFAELRGQKAAIKNMDVQASTEFLSELKVLTHVHHLNLILRRGISFLVYEYIENGNLSQYLHGTGREPLAWSTRVQIALDSARGLEYIHKHTVPIYIHRDVKPANILIYKDFHGKLLFGKVGEVCRLMDMRQGMSWLFCNVLRHCKNKLSMKMALLRTLREQHWWSLSDLSLVTTTSSSKLGRESFIDLNFPALAEEDDASQFEDSAISDAEFVNPTKVFLR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0743 301 Pfam Protein tyrosine and serine/threonine kinase 68 191 IPR001245 GO:0004672|GO:0006468
Amo15g0743 301 PANTHER - 17 195 - -
Amo15g0743 301 ProSiteProfiles Protein kinase domain profile. 65 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0743 301 SMART serkin_6 65 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0743 301 Gene3D Transferase(Phosphotransferase) domain 1 131 258 - -
Amo15g0743 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Amo15g0743 301 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Amo15g0743 301 ProSitePatterns Protein kinases ATP-binding region signature. 71 92 IPR017441 GO:0005524
Amo15g0743 301 SUPERFAMILY Protein kinase-like (PK-like) 46 195 IPR011009 -
Amo15g0743 301 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 17 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0743 Amo-Chr15 50960542 50963844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0743 21 195 Receptor kinase-like Gene Family AT3G21630 62.431 3.04e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo15g0743 PK_Tyr_Ser-Thr 5.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0743 - K13429 aip:110262853 301.982