Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0741 ATGGGAAGAATCCTCGACATGCTCCCTGAGCTTCTCAACCGAGACCCCGCCACGGACCTCTATCCGATCCTCGATTTCTTCCTCAACGACGTTGGAATCCCTTACCCCGACGCTCTTGATCTGCAGCGTGGAGGAGCAATGAAGCCAACCCTAAAATTCCTGATGAAATTAGGGTTCGCCGGTTCGATTTCCCTCACGTGCCAGAACACTGTGCTACTCGTTTCGAGCGTGGAGGAGACGCTCGTTCCGAAGATCGAGTTCTTGAAATGCTCGGGGCTTTCGGAATCGGAGGTTAATTGCATGGTTGTGAGGTCCCCTGCTTTGTTAACCTACAGTGTAGAGAAGAATTTGAAGCCTAAAGTTGAGTACTTTTTGAATGAGATGAATGGAAAAGTTTCAGAGTTGAAGCGGTTTCCGCCGTATTTTAAATTTGGCTTGGAAGGGAGTATTAAGCCAAGGCATAAGGTGTTGGTTGAGAATGGGGTGAAACCACCGTTGCATCTTATATTGAAGGGTGATGATGGTGGGTTCTATGAAACACTGATTAATACCCGGTTAAGAAAGCTTGATGGAAGCATGCTTTCTCATCAAATGGTGGTGGATGGGGAGTGGGTCGGCATGGCTTCATCGGGCATAATTTTCGAGAAAATGCTGGAAATGCAACAAAAGCTTGGTCATTTAAATCCATACTTTTTGTGTTATACAGATAAGAGGGCTGCATGTTATTTGATCAGAAGAGCCATGATCAATGGATTCCTTCCGCTTCCTCCACTCTGTAGCCGAAAGAAAAAAGAGGATAACAAACAGCAAATCACCCTCTTCTCCTCGTCGTGGAATCTCTATTCGAACACCTCGCCGCCGCTCGCGTCGCTCATCTTATCGGCTCGCCTCTTTGGTCTCTGGCCTTTGTTTACCGCACCGTTACTCACCTCTAGGGTAATTACTCCTCGGCTCCTCCCACACCTGCGTCTCTCTCTTTGTTACTGCACGGTTCATCTACTTTATCTTTGTCGTTGGCTCGCCGCCAAAATAGCCTCTCTGCTCGCCTCTCCGTTCTTCGTTGTGAGTGATGAGGAGCTGAGAATGGGCCTTGTTTATAATGTAAAAGAAAAATATTGCATAGATACTGAAACCATGCTTTGA 1143 0.4698 MGRILDMLPELLNRDPATDLYPILDFFLNDVGIPYPDALDLQRGGAMKPTLKFLMKLGFAGSISLTCQNTVLLVSSVEETLVPKIEFLKCSGLSESEVNCMVVRSPALLTYSVEKNLKPKVEYFLNEMNGKVSELKRFPPYFKFGLEGSIKPRHKVLVENGVKPPLHLILKGDDGGFYETLINTRLRKLDGSMLSHQMVVDGEWVGMASSGIIFEKMLEMQQKLGHLNPYFLCYTDKRAACYLIRRAMINGFLPLPPLCSRKKKEDNKQQITLFSSSWNLYSNTSPPLASLILSARLFGLWPLFTAPLLTSRVITPRLLPHLRLSLCYCTVHLLYLCRWLAAKIASLLASPFFVVSDEELRMGLVYNVKEKYCIDTETML* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0741 380 Gene3D Transcription termination factor 3, mitochondrial 1 190 IPR038538 -
Amo15g0741 380 PANTHER CGI-12 PROTEIN-RELATED 1 190 IPR003690 GO:0003690|GO:0006355
Amo15g0741 380 SMART mt_12 99 131 IPR003690 GO:0003690|GO:0006355
Amo15g0741 380 SMART mt_12 2 34 IPR003690 GO:0003690|GO:0006355
Amo15g0741 380 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Amo15g0741 380 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Amo15g0741 380 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 1 190 - -
Amo15g0741 380 Pfam mTERF 35 175 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0741 Amo-Chr15 50880093 50882519 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo15g0741 mTERF 2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0741 K15032 - vvi:100247222 208.379