Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0699 ATTTTTCACCATTTTGTTGGATATAGAGAAGTGAGGCTTGTGAGTAAAGAATCTAAACATCGTTGTAGAGATCCTCTTATTCTTTGTTTTGTGGATTTTACAAATCCAGCTTGTGCAGCAACTGCAATGAGTGCCTTGCAAGTTGATGTCTTGAGATGTAATAAAAGGCTATTACAAACTCATTTTGACGATAACGATTCTTCTCCTTCAACATTGAGGTTGTCTTCAGTGGCTCTGAGAAGGGATGTCCAACGATTCTACTATTTTCTTGAATGCCCAAAATATGGACGATTTGGTGTCTGCAAGAAATATTCTAACAAAAATGCAGTTGGAAAAAATCTAAGTCATAGTTTCGTCTGTGCCAAAGAGGGTGTTCGTAAATCAGACAAAAGAGATTCTTTGACTGTCATCCCTAGACTTAAAACAAGGAGTAATTGTTTGGTAAAATTAGGAATCAGATATATTAAAGGCATTGAAAAGTGTGAGATTCATGATTTTTTCAGTGAGCATAATCATCATTTGCATCTTCCACAGACAATTCACATGTTAGCATGTCAACGAAAAGTATCTCAGGTTCAAGCTCAAGAAATTGAATTGGCAGATGACTCAGGAATCACACAACGAGCTTCATTTGAATTGATGAGTAGACAAGTTGGTGAAAGAGAAAATATTGGTTATACACGTTTAGACCAAAAAAATTATCTCCGTACTAAAAGAATGAGAAGCATGGCATACGGGGAGGCAGGCAGCTTTTAG 756 0.3651 IFHHFVGYREVRLVSKESKHRCRDPLILCFVDFTNPACAATAMSALQVDVLRCNKRLLQTHFDDNDSSPSTLRLSSVALRRDVQRFYYFLECPKYGRFGVCKKYSNKNAVGKNLSHSFVCAKEGVRKSDKRDSLTVIPRLKTRSNCLVKLGIRYIKGIEKCEIHDFFSEHNHHLHLPQTIHMLACQRKVSQVQAQEIELADDSGITQRASFELMSRQVGERENIGYTRLDQKNYLRTKRMRSMAYGEAGSF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0699 251 Pfam FAR1 DNA-binding domain 98 174 IPR004330 -
Amo15g0699 251 Gene3D - 1 67 IPR012677 -
Amo15g0699 251 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 1 47 - -
Amo15g0699 251 PANTHER NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATED 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0699 Amo-Chr15 47159630 47168791 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g0699 FAR1 7.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0699 - - ahf:112709060 264.233