Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0664 ATGGGGTGCTCCTTCTCTGGTCTGAACGCCTTATACGACGCCGTTAGCGGCGGAGCCGACGTTTGGATCAACGAGAATCGCTTCCGCGTCGTCCGGCAGCTCGGCGAAGGTGGATTCGCCTACGTTTACTTGGTCAAAGAAGTTCCCGCTGACTCTTCTTCTCTCACTGGCCTCGCCAACAAGCTCAAGAATCCCTCTCTTCTCTCCGGTGATGGAACTTATGCAATGAAAAAGGTTCTTATTCAGAATAGTGAGCAATTGGCATTGGTGAAGGAAGAGATCCGTGTTTCTTCTCTTTTCAGTCATCCGAATCTGCTTCCACTTCTTGACCATGCAGTCATTTCAGTAAAGCCTACTCAAGAGACATCTTGGACCCATGAAGCTTACTTGCTATTTCCTGTTCATTTGGATGGAACATTGTTTGACAATGCTAATACAATGAAAGCCAAGAAGGAGTTCTATTCTACCACAGATGTTCTTCAAATATTTAGTCAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATCCTCCATATGCACATAATGATGTTAAACCAGGCAATGTTCTCATAACACATAGAAAAGGCCAACCTCCACTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAAGCAAATTCGCTCCCGATCAGAGGCTTTGCAGTTGCAGGAGTGGGCGGCTGAACACTGCTCTGCCCCTTACCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCAAGCTGATATTGACGAGAGGACTGATATTTGGTCACTTGGATGCACACTGTATGCGATTATGTATGGGGTATCTCCATTTGAATATGCACTTGGTGAGTCCGGCGGGAGCCTGCAACTGGCTGTTGTAAATGCTCAGGTGAAATGGCCAGCTGGACCTAAGCCTCCGTATCCAGAGGCGCTGCATCAGTTTGTGACTTGGATGCTTCAGCCTCAGGCCACCGTTCGTCCGCGAATAGATGATATCATTATCCATGTTGACAAGTTGATCTCGAAGTTCTCTCCTTGA 1032 0.4797 MGCSFSGLNALYDAVSGGADVWINENRFRVVRQLGEGGFAYVYLVKEVPADSSSLTGLANKLKNPSLLSGDGTYAMKKVLIQNSEQLALVKEEIRVSSLFSHPNLLPLLDHAVISVKPTQETSWTHEAYLLFPVHLDGTLFDNANTMKAKKEFYSTTDVLQIFSQLCAGLKHMHGLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKQIRSRSEALQLQEWAAEHCSAPYRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLISKFSP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0664 343 Gene3D Transferase(Phosphotransferase) domain 1 14 342 - -
Amo15g0664 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 342 - -
Amo15g0664 343 CDD STKc_16 27 339 - -
Amo15g0664 343 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0664 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Amo15g0664 343 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0664 343 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Amo15g0664 343 PANTHER - 1 342 - -
Amo15g0664 343 Pfam Protein kinase domain 73 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0664 Amo-Chr15 44595527 44599561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0664 33 333 EF-hand Containing Proteins AT4G04710 24.839 1.73e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Amo15g0664 Pkinase 5.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0664 K08856 - egr:104421163 630.557