Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0658 ATGGGAACCATTCTCAATGTAAGCATCTTAGCGCTATTCTTGGCGAGCTTCAATGCGTATTGCGGATTGAAGAAAAGAAAGCTCAACAAACTGAAAGAACAATTTTTTCAACAATTATTTGCCGAAGAGAAAGGTTCAATTGAAACAGCTAAAATCTTTAGCATAGAAGAGCTAAAGAAGGCCACTAACAACTTTGATGAAGGCAAGATCTTAGGCCGAGGAGGCTATGGAATAGTTTACAAAGGATTATTACAAGACAACACAACTGTTGCAATCAAAAAGTCCAAAATCAGTGACCGAAGCCAGATTGAACAATTCATCAATGAGGTGGTTATACTTACCCAAATCAACCATACAAATGTGGTTAAACTTTTGGGGTGTTGCTTAGAGACACAAGTTCCATTGCTTGTTTATGAATTCATTCAAGGTGGTACTCTTGATGATCATCTTCATGGTCAGAACCAATCTTTAAAGCTTAACTGGAAAACAAGATTGAGAATAGCAGCAGAAACTGCTGGGGCTTTGGCATACTTGCATTCTGCTACTTGTCCACCAATTATACATAGAGATGTTAAAACTACCAACATACTTCTTGATCATAATCTCAAAGCAAAGGTTTCTGATTTCGGAGCTTCAAAGATTGTTCCTCTTGATAAAACCGAACTATCCACCATGGTGCAAGGGACTGTGGGGTATCTAGACCCTGAATACTTCCACACAAGCCACTTAACAGAAAAGAGTGATGTGTATAGTTTCGGAGTTGTTCTAGCAGAGTTACTTACAGGACGAAAAGCACTTTGTTTTGAGCTGCCTGAGGAGGATAGAAACCTTGCAATGTACATTTCTTCGATGAATATGAATCTTCTACTTCACATTCTGGACGGAGCCATAATTGATGAGGCAAAGCTCGAGCAACTAATGGAATTTGGGAATATCGCAAAACGATGTTTGGAATAA 957 0.3877 MGTILNVSILALFLASFNAYCGLKKRKLNKLKEQFFQQLFAEEKGSIETAKIFSIEELKKATNNFDEGKILGRGGYGIVYKGLLQDNTTVAIKKSKISDRSQIEQFINEVVILTQINHTNVVKLLGCCLETQVPLLVYEFIQGGTLDDHLHGQNQSLKLNWKTRLRIAAETAGALAYLHSATCPPIIHRDVKTTNILLDHNLKAKVSDFGASKIVPLDKTELSTMVQGTVGYLDPEYFHTSHLTEKSDVYSFGVVLAELLTGRKALCFELPEEDRNLAMYISSMNMNLLLHILDGAIIDEAKLEQLMEFGNIAKRCLE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0658 318 ProSiteProfiles Protein kinase domain profile. 65 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0658 318 Gene3D Phosphorylase Kinase; domain 1 36 140 - -
Amo15g0658 318 SMART serkin_6 65 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0658 318 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 10 318 - -
Amo15g0658 318 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Amo15g0658 318 Pfam Protein tyrosine and serine/threonine kinase 68 264 IPR001245 GO:0004672|GO:0006468
Amo15g0658 318 Gene3D Transferase(Phosphotransferase) domain 1 141 318 - -
Amo15g0658 318 SUPERFAMILY Protein kinase-like (PK-like) 47 317 IPR011009 -
Amo15g0658 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Amo15g0658 318 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 10 318 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0658 Amo-Chr15 44351932 44353259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0658 23 316 Receptor kinase-like Gene Family AT1G21230 58.086 1.57e-118 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo15g0658 PK_Tyr_Ser-Thr 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0658 - - adu:107460563 620.157