LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo15g0571	ATGCAAAATCAAAGTGTGCATTTTGTTCTATCCACTGATGCAAAACCAAGGCTTAAATGGACTCCTGAGCTTCACCAAAGATTCATTGAGGCAGTTCATCAGCTTGGAGGTGCAGAGAAAGCAACCCCAAAGAGTCTTATGAGAGTGATGGGGATACAAGGACTTACTTTACTTGGGAAAAGCCACCAGCTAGAAACCTGTTCCGACAACCAACAAGAAGATTGCAGAAAAATCAAGAGCAGTCATGGTCATTGCAGCAAGGAAAACAGTGTTGGGGAACAGAAACAAGTCACTGAGAACATGAAGATAGCTCAGGCTCTCCATATGCAAATGGAGGTACAAAGGAAACTTTGTGAACAAATTGAGGTGCAGAAACATTTACAGCTTCGAATTGAAGCTCAAGGGAAGTACTTGCAATCGGTGTTAAAGAAAGCGCAAGAGYCGCTTCAAGGATACAATTCTTCCTCAYTAGGACTAGAACTCACAAAAGCAGAACTCTCTCAACTAGTTACAGTAATCAACAATGCTTGTCCAGGTTCTCCAATCTCAGAACTCACAGAAACRAGAGGGTTAAGTTTGAGAAGTGATGARGAGAGGAAACAAGACAAGGGAACCATGTGCTCATTGGAGAGTTCTTTGACSTCTTCTGAAAGCTGTGGGAGAAAGGAAGAGATACACCAGCCAATGGAAGAAGAAACAAGATGGAACTTGAAAAGTTTTAATGAAATTTCACTTGAATTTCCCTTTGAGGCATTTCATCAAACAGGTAAAGGGCAAAGTGGGGATGACTCGAGTAAAGAAGAAAGAGTGAGAAAGAGAAATGCAAAAACTGATTCTGAAGGTAGCTACTGTGTTGAGCAACCATCTGGGAAAAGATGTGGCAACAAATTGAGAAAACTTGAATTTGACTTAAACAACCAATATCACAATGACACGGACTCAAGATGA	948	0.4082	MQNQSVHFVLSTDAKPRLKWTPELHQRFIEAVHQLGGAEKATPKSLMRVMGIQGLTLLGKSHQLETCSDNQQEDCRKIKSSHGHCSKENSVGEQKQVTENMKIAQALHMQMEVQRKLCEQIEVQKHLQLRIEAQGKYLQSVLKKAQEXLQGYNSSSLGLELTKAELSQLVTVINNACPGSPISELTETRGLSLRSDEERKQDKGTMCSLESSLTSSESCGRKEEIHQPMEEETRWNLKSFNEISLEFPFEAFHQTGKGQSGDDSSKEERVRKRNAKTDSEGSYCVEQPSGKRCGNKLRKLEFDLNNQYHNDTDSR*	316

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo15g0571	315	PANTHER	MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN	2	314	-	-
Amo15g0571	315	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR PHL11	2	314	IPR044848	GO:0003700
Amo15g0571	315	SUPERFAMILY	Homeodomain-like	14	57	IPR009057	-
Amo15g0571	315	MobiDBLite	consensus disorder prediction	260	279	-	-
Amo15g0571	315	MobiDBLite	consensus disorder prediction	251	296	-	-
Amo15g0571	315	Gene3D	-	14	64	-	-
Amo15g0571	315	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	15	57	IPR006447	GO:0003677
Amo15g0571	315	Pfam	MYB-CC type transfactor, LHEQLE motif	101	147	IPR025756	-

Showing 1 to 8 of 8 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo15g0571	Amo-Chr15	36705199	36706661	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo15g0571	8	188	G2-like Transcription Factor Family	AT1G69580	51.244	8.10e-57	185

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Amo15g0571		Myb_CC_LHEQLE	9.5e-21	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo15g0571	-		-	gmx:100787178	389.423

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo05g2785	05	70407413	70409374	Amo15g0571	15	36705199	36706661	hybridization

Showing 1 to 1 of 1 entries