Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0571 ATGCAAAATCAAAGTGTGCATTTTGTTCTATCCACTGATGCAAAACCAAGGCTTAAATGGACTCCTGAGCTTCACCAAAGATTCATTGAGGCAGTTCATCAGCTTGGAGGTGCAGAGAAAGCAACCCCAAAGAGTCTTATGAGAGTGATGGGGATACAAGGACTTACTTTACTTGGGAAAAGCCACCAGCTAGAAACCTGTTCCGACAACCAACAAGAAGATTGCAGAAAAATCAAGAGCAGTCATGGTCATTGCAGCAAGGAAAACAGTGTTGGGGAACAGAAACAAGTCACTGAGAACATGAAGATAGCTCAGGCTCTCCATATGCAAATGGAGGTACAAAGGAAACTTTGTGAACAAATTGAGGTGCAGAAACATTTACAGCTTCGAATTGAAGCTCAAGGGAAGTACTTGCAATCGGTGTTAAAGAAAGCGCAAGAGYCGCTTCAAGGATACAATTCTTCCTCAYTAGGACTAGAACTCACAAAAGCAGAACTCTCTCAACTAGTTACAGTAATCAACAATGCTTGTCCAGGTTCTCCAATCTCAGAACTCACAGAAACRAGAGGGTTAAGTTTGAGAAGTGATGARGAGAGGAAACAAGACAAGGGAACCATGTGCTCATTGGAGAGTTCTTTGACSTCTTCTGAAAGCTGTGGGAGAAAGGAAGAGATACACCAGCCAATGGAAGAAGAAACAAGATGGAACTTGAAAAGTTTTAATGAAATTTCACTTGAATTTCCCTTTGAGGCATTTCATCAAACAGGTAAAGGGCAAAGTGGGGATGACTCGAGTAAAGAAGAAAGAGTGAGAAAGAGAAATGCAAAAACTGATTCTGAAGGTAGCTACTGTGTTGAGCAACCATCTGGGAAAAGATGTGGCAACAAATTGAGAAAACTTGAATTTGACTTAAACAACCAATATCACAATGACACGGACTCAAGATGA 948 0.4082 MQNQSVHFVLSTDAKPRLKWTPELHQRFIEAVHQLGGAEKATPKSLMRVMGIQGLTLLGKSHQLETCSDNQQEDCRKIKSSHGHCSKENSVGEQKQVTENMKIAQALHMQMEVQRKLCEQIEVQKHLQLRIEAQGKYLQSVLKKAQEXLQGYNSSSLGLELTKAELSQLVTVINNACPGSPISELTETRGLSLRSDEERKQDKGTMCSLESSLTSSESCGRKEEIHQPMEEETRWNLKSFNEISLEFPFEAFHQTGKGQSGDDSSKEERVRKRNAKTDSEGSYCVEQPSGKRCGNKLRKLEFDLNNQYHNDTDSR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0571 315 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 314 - -
Amo15g0571 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 314 IPR044848 GO:0003700
Amo15g0571 315 SUPERFAMILY Homeodomain-like 14 57 IPR009057 -
Amo15g0571 315 MobiDBLite consensus disorder prediction 260 279 - -
Amo15g0571 315 MobiDBLite consensus disorder prediction 251 296 - -
Amo15g0571 315 Gene3D - 14 64 - -
Amo15g0571 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 57 IPR006447 GO:0003677
Amo15g0571 315 Pfam MYB-CC type transfactor, LHEQLE motif 101 147 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0571 Amo-Chr15 36705199 36706661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0571 8 188 G2-like Transcription Factor Family AT1G69580 51.244 8.10e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo15g0571 Myb_CC_LHEQLE 9.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0571 - - gmx:100787178 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2785 05 70407413 70409374 Amo15g0571 15 36705199 36706661 hybridization