Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0538 ATGAGTGGGGATATATGTAGTATGTATTCAATTGTTGGGTTAACAATTGATTTTGACTGGAAGATGGCAGATCCTGAGAGTGCAATTGTTTGGCGCCATCAAGAAGCCGATCCTTATTTTGGATCATGCGAATCCAAAGAGCTTCTTGATCACCTTGAGAATGTGCTGGCCAATGAGCCTGTTGTTGTTAAAATGGGACAACACATAGTTGAAGTGAAACCTCAAGTAGACAAAAATAAAGGTGTGAGTAAGGGTATAGTTGTGGAGAATCTAATCTCAAACATGAGGAGTGAGGATGAAGACGTGTTCGAAAGCATTGCTCGTTTAGTTTCAAATCTAGCACTTCCAACAATATCACAAGTGTTTGCATGCACGGTTGGCCAGAAACCAAGCATGGCAAAGTACTATTTGGAGGATACCAGCGAAGTTATCAGGATCGCTGCTTTTTTTAAGGGATTGAAATGGGTTGAAGAAGTGAATTTACATCCCAAAAAGAGTTAA 501 0.4012 MSGDICSMYSIVGLTIDFDWKMADPESAIVWRHQEADPYFGSCESKELLDHLENVLANEPVVVKMGQHIVEVKPQVDKNKGVSKGIVVENLISNMRSEDEDVFESIARLVSNLALPTISQVFACTVGQKPSMAKYYLEDTSEVIRIAAFFKGLKWVEEVNLHPKKS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0538 166 Pfam Trehalose-phosphatase 26 141 IPR003337 GO:0003824|GO:0005992
Amo15g0538 166 SUPERFAMILY HAD-like 26 150 IPR036412 -
Amo15g0538 166 Gene3D - 42 160 IPR023214 -
Amo15g0538 166 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 147 IPR001830 GO:0003824|GO:0005992
Amo15g0538 166 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 24 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0538 Amo-Chr15 31372980 31373667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0538 26 146 Trehalose Biosynthesis Gene Families AT1G23870 56.618 5.80e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0538 K16055 - gmx:100810498 182.57