Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0519 ATGTTCATATCAAAAAAATTGCATCTGACAAAAAAAAAAAAAAAATTCTTCATCGATACTCTCAAAGACTGTCTCTCTCACTCTCAATTCTGCCACCTTCATATTAGTTCAAATCCAAATCAAATGGCTTCGGATAAGAAACTTGCAAATCCAATGAGAGAGATTAAGGTGCAGAAGCTCGTTCTCAACATCTCCGTGGGTGAGAGTGGAGATCGTCTAAGCAACTTGAAGGCCTCTCCTCCACAGCAATCCTCAGCCAAGACGGCAGTGTTTGGATTCAGCTCTAATTTCCCTCAGGTTATCTTCAATTCTTCTCAATTTCTCTCTCCAAAACTCTCCTTCTTTCTTAGTGCTTTGTTTTCTAGAATCATCTCGTTCTTTTTCTTCCGATAA 393 0.3893 MFISKKLHLTKKKKKFFIDTLKDCLSHSQFCHLHISSNPNQMASDKKLANPMREIKVQKLVLNISVGESGDRLSNLKASPPQQSSAKTAVFGFSSNFPQVIFNSSQFLSPKLSFFLSALFSRIISFFFFR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0519 130 Gene3D - 44 94 IPR022803 -
Amo15g0519 130 PANTHER 60S RIBOSOMAL PROTEIN L11-1 27 92 - -
Amo15g0519 130 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 27 92 IPR002132 GO:0003735|GO:0005840|GO:0006412
Amo15g0519 130 SUPERFAMILY RL5-like 40 121 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0519 Amo-Chr15 28263007 28263557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0519 42 91 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 70.588 2.78e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0519 K02868 - cit:102630091 67.0106