Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0515 ATGCTCAAGGTTAAGAGTGATGGCCAATTTTCGGCTTACTCAAGTGAACCTCCAAAGAAGTTCCAAGTGAATGGTTCTGATGTGGATCTTGAGTGGCTTCCTAACGGCAAATTGATAGCTGGGAAATTTGAAGCCAAATTCTTTGATAAGATTCTTCAAGAAGAAATTGGTGATGTTAAAGGGAATTTTGGACCAATTAATGCATTAGCCTTTAACCCTGATGGGAAAAGTTTTTCAAGTGGAGGTGAAGACGGTTATGTACGGTTGCATCACTTTGACCCGGATTATTTCAATATCAAAATATAG 306 0.3856 MLKVKSDGQFSAYSSEPPKKFQVNGSDVDLEWLPNGKLIAGKFEAKFFDKILQEEIGDVKGNFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0515 101 Gene3D - 1 101 IPR015943 GO:0005515
Amo15g0515 101 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 40 101 - -
Amo15g0515 101 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 89 IPR001680 GO:0005515
Amo15g0515 101 Pfam WD domain, G-beta repeat 56 89 IPR001680 GO:0005515
Amo15g0515 101 SUPERFAMILY WD40 repeat-like 14 97 IPR036322 GO:0005515
Amo15g0515 101 SMART WD40_4 52 91 IPR001680 GO:0005515
Amo15g0515 101 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 40 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0515 Amo-Chr15 28192492 28194362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0515 40 101 Eukaryotic Initiation Factors Gene Family AT2G46290 88.710 3.78e-35 121