Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0488 ATGCCTACTGTTGGGGATGTCAGAGTATTATCTTTGATGATACAGGGCCAAAATGGAAGTCATTTAGAACATAGGCCTGTTCCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTTGACCCTACAGAGCTGGACTTCTCGAATTCAATTTGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAGAGCTCATTGGCGTGGAACACCTGTTGCTGTCAAACGCATTCTTCCAGCTCTTTCAGATGATAGACTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAAACTTCGCCACCCTAATGTTGTTCAATTCCTTGGAGCTGTTACTGATAGGAAGCCTCTAATGTTGATTACTGAGTATCTAAGAGGGGGTGATCTTCATAGGTACCTCAAGGTTAAAAGTTCACTTAGTACTTCAACAGCGATCAACTTTGCCATGGATATTGCCAGAGGGATGGCCTATCTTCACAGTGAACCAAATGTTATAATTCATCGAGATCTCAAGCCAAGGAATGTTCTTTTGGTCAATTCTTGTGCCGACTATTTAAAAGTAGGAGATTTTGGACTTAGCAAGCTTATTAAAGTCAAAAGTTCTCATGATGTGTACAAGATGACTGGTGAAACTGGAAGTTATCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATATGACAAGAAGGTTGATGTGTTCTCCTTTGCTATGATTTTGTATGAGATGCTTGAAGGTGAACCACCATTTACAAATTTAGAACCTTATGAGGGAGCCAAGCATGTGGCTGAGGGACACAGGCCAATTATTCGAGCGAAAGGTTATGGTCCTGAACTACGAGAGTTAATAGAGCTTTGTTGGGCTGGTGACATGACTCAAAGACCTTCCTTCCTAGATATCCTTAAACGGCTTGAGAAGATCAAAGAAAAACCTTCAGAGCATCACTGGCATTTGTTCTCTTCATAA 966 0.4151 MPTVGDVRVLSLMIQGQNGSHLEHRPVPPPLPNKCDWEVDPTELDFSNSICIGKGSFGEILRAHWRGTPVAVKRILPALSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHRYLKVKSSLSTSTAINFAMDIARGMAYLHSEPNVIIHRDLKPRNVLLVNSCADYLKVGDFGLSKLIKVKSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFTNLEPYEGAKHVAEGHRPIIRAKGYGPELRELIELCWAGDMTQRPSFLDILKRLEKIKEKPSEHHWHLFSS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0488 321 SMART serkin_6 46 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0488 321 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 15 313 - -
Amo15g0488 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Amo15g0488 321 Pfam Protein tyrosine and serine/threonine kinase 52 304 IPR001245 GO:0004672|GO:0006468
Amo15g0488 321 Gene3D Transferase(Phosphotransferase) domain 1 126 318 - -
Amo15g0488 321 ProSitePatterns Protein kinases ATP-binding region signature. 52 73 IPR017441 GO:0005524
Amo15g0488 321 CDD STKc_MAP3K-like 52 304 - -
Amo15g0488 321 PRINTS Tyrosine kinase catalytic domain signature 159 177 IPR001245 GO:0004672|GO:0006468
Amo15g0488 321 PRINTS Tyrosine kinase catalytic domain signature 121 134 IPR001245 GO:0004672|GO:0006468
Amo15g0488 321 PRINTS Tyrosine kinase catalytic domain signature 275 297 IPR001245 GO:0004672|GO:0006468
Amo15g0488 321 SUPERFAMILY Protein kinase-like (PK-like) 45 312 IPR011009 -
Amo15g0488 321 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 313 - -
Amo15g0488 321 PIRSF ILK 6 321 - -
Amo15g0488 321 Gene3D Phosphorylase Kinase; domain 1 38 125 - -
Amo15g0488 321 ProSiteProfiles Protein kinase domain profile. 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0488 Amo-Chr15 25045663 25051551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0488 16 321 MAP Kinase Kinase Kinase AT1G14000 82.410 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Amo15g0488 PK_Tyr_Ser-Thr 5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0488 - - twl:119991311 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0488 15 25045663 25051551 Amo15g0488 15 25045663 25051551 ECH