Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0481 ATGTCCTCCGAAGACATAGGTCTCGTACCCGACCAGAGGATCGAAACTGGTCTCAGCTCCTCACTCGTTTTTCAAGACGAAACCTTGCGCTTCAGCTGCGGGGGCCCGCAGCGTCGGGTCGGGGACCCGGGCCCGAAGACCCGGGATCTTGGTGGGTTCATCGATGACAAGATGTTCTCCATGGAGCGCGACCGGTACTTCGCCGCACAGAGCTCTGAGTTCCGCCGGAGCGTCTACGGCGACTGCTCCGGCCGCCGTGATCCGCCGGGAGCACGCAATTGGAGTAGGAATGGTGGCGCCAACACTCCAAGCGGCGACGAATCCGACGGGGATGATGACGAAGATGATGACGAGGATGACGATGACGACGATGATGTCGAAGGTGATGAAGGGCTTGTTGGTGTTGGTGATGGAAGCAAGCGCAATTCGAATCCAATTCTTGACATTAACGGTAGCAACGGTAGCAACGGTGGTGGCGGTGGTAGTTTGGGTGGTGTTACTGCTGCAGAGCGGATGGCAAATGGGAAAGGACAGCATCATTCGTCTTATGTTTCTACTAGAGAAATGTTGGGGAAGGATGGTGATATGGGGCAGCTGGTGCATAACAATGCGAGTGGTACTGATGAAGATCATCATCAGAGAGAGAGATTGGGTAAATCACAGAGTGCTGTAACCATTGCTGAAACTGATTGTGATGAGTACTATTCACATTATCTTCATGGCACGGAAGGATCGGGTTCTGTGCAGAAAGTTATGGTGGATGAGAATGGTTGTGGGTTTAGTGGAAGAAAGGACGTTCTGTTTTCAAGCGAGTCAGGGGAGTCGTTGAGGGCAATTCTTTCTGATCCTGTTACAGGTGCACTTATGGACGATGCCATGATATTACCTTGTGGGCATTCATTTGGTGGAGGTGGAATACAGCATGTTATTAGAATGAAAGCTTGCTGCACCTGTTCTCAACCCACGTCCGAGGAATCAATATCTCAAAACCTATCACTTCGAGCTGCTGTGCAGGCATATCGGCGTGAAGAGGAGTCACAATTTTACCGGTCATCTAAAAGACGAAGAGAGAGATTTGATCAGGTGTGTTTTTCCATTCTGAACTATGCTTCAGTCTCTGGTGGTTTTGGAGATTCAGCTGTTGTAGAACCACCAAGGGGGAGAGGTGTTCAATTTCCTTTTGCTGTGATGGACCGTGTTATCATAAAGGGAAACAAGAGGACACCGCAACGCTTTGTTGGGCGTGAAGCTATTGTAACAACACAATGCCTTAATGGATGGTATGTGGTGAAGACACTGGACAATGCAGAGAGTGTGAAATTACAGTATCGGTCCCTTGCTAAGGTTTTGGATGATTCTTCAAAACCTTCCTCCACCAAGATGCCACCTAATTGGCGTTAG 1401 0.4968 MSSEDIGLVPDQRIETGLSSSLVFQDETLRFSCGGPQRRVGDPGPKTRDLGGFIDDKMFSMERDRYFAAQSSEFRRSVYGDCSGRRDPPGARNWSRNGGANTPSGDESDGDDDEDDDEDDDDDDDVEGDEGLVGVGDGSKRNSNPILDINGSNGSNGGGGGSLGGVTAAERMANGKGQHHSSYVSTREMLGKDGDMGQLVHNNASGTDEDHHQRERLGKSQSAVTIAETDCDEYYSHYLHGTEGSGSVQKVMVDENGCGFSGRKDVLFSSESGESLRAILSDPVTGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPTSEESISQNLSLRAAVQAYRREEESQFYRSSKRRRERFDQVCFSILNYASVSGGFGDSAVVEPPRGRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDSSKPSSTKMPPNWR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0481 466 MobiDBLite consensus disorder prediction 79 167 - -
Amo15g0481 466 MobiDBLite consensus disorder prediction 32 53 - -
Amo15g0481 466 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 51 465 - -
Amo15g0481 466 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 51 465 - -
Amo15g0481 466 MobiDBLite consensus disorder prediction 193 221 - -
Amo15g0481 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 345 IPR013083 -
Amo15g0481 466 MobiDBLite consensus disorder prediction 143 160 - -
Amo15g0481 466 ProSiteProfiles U-box domain profile. 275 347 IPR003613 GO:0004842|GO:0016567
Amo15g0481 466 MobiDBLite consensus disorder prediction 106 131 - -
Amo15g0481 466 SUPERFAMILY RING/U-box 274 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0481 Amo-Chr15 23484436 23495068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0481 220 465 Plant U-box Gene Family AT5G05230 57.312 1.70e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0481 - - adu:107470194 832.017