Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0458 ATGGAGGAGAACAGCCTTGCTGAGACATGCTGGTTCAACATCTTGGCCAATGATCTCCTACGATTCGTGTATTTTAAAGGCAACTGGCAATTGGATGAGGCCTTCTCCGGTGACTACTATAATTTCACCTCTCCGGACAGCGGAGCTTTATCGGCGGTATCCAAGGACATTGTCTTTGACAAAAATAGCATGAAGCAGATCAATGAAAGGCTCTTTGCACTTAGGATAGTCATTCCCAACATCACCAAGATGGATAAGGCATCAATCATAAAGGATGGAACTGATGAGATAATGGAGGTTAAATCTAAGAGGCTCAATAATCCAATTATTACAGCATCGGCAGCAGCAGGAGACTATGATTTTGAACAGGATCTTCCCATTGTTATCAGATCTAAGAAGAAGAGACCCGATAACCTTTTCTTTGATACCTCAACTTCTTCTTCCTCAATAAATAACACCAACTATTTCCCTATTGAACTGATTGATCTTTATGCACAATTGGGTTCTTCTTGGCAAGAATGCAAGAACGAAAACTGA 537 0.4097 MEENSLAETCWFNILANDLLRFVYFKGNWQLDEAFSGDYYNFTSPDSGALSAVSKDIVFDKNSMKQINERLFALRIVIPNITKMDKASIIKDGTDEIMEVKSKRLNNPIITASAAAGDYDFEQDLPIVIRSKKKRPDNLFFDTSTSSSSINNTNYFPIELIDLYAQLGSSWQECKNEN* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0458 178 PANTHER TRANSCRIPTION FACTOR BHLH35 28 151 - -
Amo15g0458 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 101 IPR036638 GO:0046983
Amo15g0458 178 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 100 IPR011598 GO:0046983
Amo15g0458 178 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 28 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0458 Amo-Chr15 22178186 22179917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0458 28 150 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 42.308 2.61e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0458 - - adu:107496381 182.185