Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0441 ATGGAATTGGAAGCTGATCATAATCACCATCACCATCACCATCAAAACGGAATCAGAACCAGACCTAATTTCCCTCTTCAGCTGTTGGAGAAGACTAAAGACGTCGAAGACTCAGTCGCGGAACAGCCATGCTCCACCGTCGCCGAACAACCCGGTGACGGAGCAGGCACCGCCGTCACTTTACAGGACCAACAACAGAATAGCACCAAGAAGCCGCCGCCAAAGCGGACCTCCACCAAGGACCGGCACACCAAGGTGGACGGCCGCGGCCGCCGGATCCGGATGCCGGCGGCCTGCGCCGCTCGCGTGTTCCAGTTGACGCGGGAGTTAGGGCACAAATCCGACGGCGAGACGATCGAGTGGCTACTACAGCAAGCGGAGCCGGCGGTGATCGCCGCAACCGGCACCGGCACCATCCCCGCCAACTTCACCTCGCTCAACATCTCACTTCGAAGTTCCGGGTCTACCGTTTCGGCGCCGTCACACTACTTCAGAGGAAGCTACTTCAATCCTAGCACGTTCTCTTCGGCCGCCGTTGCGGCGGCTGTCGGCGGCGGAAGGATCCGCGGCGGAGCTGGCGATAATTGGGAGCGTAGCATGGGCATGAATATGAACATGAACATGAATATGAACATAGCAACGATGGAAGATTCTAGAAGGTTGTTGTTTCCAGGTTCATCGGAGAATTGTTCTAATTCCATGGGATTGAACTTCAACCCTAGCACCGTGAATGCCGTTCTCCAAGCAAAGCAAGAACTTCGTGAAGATGGCGCCGCCGCCGCTGGTGGTGGTGGAAATCTTGATTTGGATGGCGGTGATTGCGACGGAAACATGGCTAGAAAGAGAAGAATGGAACAAGAGGTTTCGGTTTCACACCAGATAGCAGGAAACTACTTGTTACAATCAAGTACCGCGGGTTCGGTTCCGGCGAGCCACGCTTCGAATCCCGCAACGTTTTGGATGGTGACTGGGCACCAAGGCATGAATGGTGGTGGCGGCGGCGGCGGCGGCGGTAGTAATAATGATCAAATTTGGGCAATTCCGTCACTGGGGAGTGGTGGTGGAGTTTATAGAGGGGGTATGCCTGGCGGTGTTGGTGGGATTCATTTCATGAATTTTGGTTCACCAATGTCTCTTATGCCTGGTGGACAACTAGGTTCCGCCATGGTTGGTGGCGGCAGCGGCGGTGGTGGAGCAATGCTGAGTGAAAGCAATAATTTAGGTATGCTTGCAGCACTTAATGCCTATAGGCAGATTCCGGCCAATGGCAGTGGCGTTTCGGAGTCTCCGGCGAGCACTGGAAACCACCAACATCACGGTGGAGATGATGGGCATGAAACAACAAGTCAACAGCAACATTCTTGA 1365 0.5473 MELEADHNHHHHHHQNGIRTRPNFPLQLLEKTKDVEDSVAEQPCSTVAEQPGDGAGTAVTLQDQQQNSTKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYFNPSTFSSAAVAAAVGGGRIRGGAGDNWERSMGMNMNMNMNMNIATMEDSRRLLFPGSSENCSNSMGLNFNPSTVNAVLQAKQELREDGAAAAGGGGNLDLDGGDCDGNMARKRRMEQEVSVSHQIAGNYLLQSSTAGSVPASHASNPATFWMVTGHQGMNGGGGGGGGGSNNDQIWAIPSLGSGGGVYRGGMPGGVGGIHFMNFGSPMSLMPGGQLGSAMVGGGSGGGGAMLSESNNLGMLAALNAYRQIPANGSGVSESPASTGNHQHHGGDDGHETTSQQQHS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0441 454 MobiDBLite consensus disorder prediction 438 454 - -
Amo15g0441 454 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Amo15g0441 454 MobiDBLite consensus disorder prediction 1 90 - -
Amo15g0441 454 Pfam TCP family transcription factor 77 181 IPR017887 -
Amo15g0441 454 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 15 451 - -
Amo15g0441 454 MobiDBLite consensus disorder prediction 57 73 - -
Amo15g0441 454 MobiDBLite consensus disorder prediction 421 436 - -
Amo15g0441 454 MobiDBLite consensus disorder prediction 421 454 - -
Amo15g0441 454 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 451 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0441 Amo-Chr15 21444877 21447288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0441 22 384 TCP Transcription Factor Family AT3G47620 40.048 1.11e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo15g0441 TCP 2.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0441 - - adu:107489244 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0441 15 21444877 21447288 Amo15g0441 15 21444877 21447288 ECH