Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0438 ATGGTTGAGGTTCTGAAGTGTGAGTATGCTATTCGAGGAGATGTTGTAACACTTGCTCAGCAATTGCAAGAAGATTTGAAGGCTAAGCATGGTACTCACCCATTTGATGAGCGTATTAAAGGCCCGCGAGATACAATAGCCAAAGGAATTGAAGAACGTGATGGTTTTCCTGACAATCCCAATGACATTTTCTTGACAGATGGGGCAAGCCCAGCGACTCAAGCTCATCGTTGCGGTTTGTGTCGTCACCATGTCGCACTCAGTCGCCGCCTTCCCTGCGCTCACTTCGCCGGTGGTAGAAGAAGACGGAACCAGCATCTTGTCCCTCGGGTGGTGGTGGTCTTCGTCTTCTTGTTTCAGCCATTAATTCAGTTGGTCAGTTTTCTTCACCGTCAATCCCAGGATATTGCTTCGAGATTTAAAGCTACTATTAAGTATACAAAGACTTTGGTTGACCTGTATTACTCAATAGGAAGTTTGGTACTTATAAAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTCTATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAAGGCCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGGTTAATAATTTTTATTAG 837 0.4241 MVEVLKCEYAIRGDVVTLAQQLQEDLKAKHGTHPFDERIKGPRDTIAKGIEERDGFPDNPNDIFLTDGASPATQAHRCGLCRHHVALSRRLPCAHFAGGRRRRNQHLVPRVVVVFVFLFQPLIQLVSFLHRQSQDIASRFKATIKYTKTLVDLYYSIGSLVLIKIDEELLQEVVNMGFDRNQLVESLCNRIQNEVYGAGDDLFKELWRLCAGPLMDVPCVQDRVFYFPQGHIELLPEPTEQDLRQMKNQKSPKYDLPSNKIFKEQDFFLFYQKVNNFY* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0438 278 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 164 205 IPR015940 -
Amo15g0438 278 PANTHER ALANINE AMINOTRANSFERASE 2 3 38 - -
Amo15g0438 278 PANTHER ALANINE AMINOTRANSFERASE 2 39 74 - -
Amo15g0438 278 PANTHER ALANINE AMINOTRANSFERASE 3 38 IPR045088 GO:0008483
Amo15g0438 278 PANTHER ALANINE AMINOTRANSFERASE 39 74 IPR045088 GO:0008483
Amo15g0438 278 Gene3D Aspartate Aminotransferase, domain 1 2 52 IPR015422 GO:0003824
Amo15g0438 278 CDD UBA_SnRK1_plant 165 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0438 Amo-Chr15 20988201 20994926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0438 191 258 B3 DNA Binding Superfamily AT1G43950 43.056 2.96e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0438 K14486 - ahf:114925841 200.675