Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0386 CTTTCTCGTGCAGAATCGCATTTGAACGCTGCTTATCCTTCTTCACGGGGCATCTACCTGAGGGAGGCTACTGCTTTCCAACAATCTACTGAGCTAGGTCTCAGCTTGGACCAAGGGAAAGGAGCCGATGGAGCAGCAGCACCAGGAGTAGGCTTCTTGAAGCCACCGGAAGAGGCCTCCGGTAGCGGCAAGCACTTTCGCGACGACGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGCAGCTCCACATCCTCCAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCACACAYCATAGCTGAACGGTTGCGCAAAGAAAGAATAGCAGAAAGAATCAGGGCTCTACAAGAACTGGTTCCAAGTGTCAACAAGGTATGTAACTGCTCTAATGCACCTATTCTGGCAAAAATGGAAGCTGAAAAGCGTAGCCTTTGGTCCTGGACAGCATCACTTGAAAAGCGTAGCCTATTCCCAAACGCCAAAAGCGTAGCCCTTGGTGCAGAAAAGCGTAGCCTTTGA 564 0.5089 LSRAESHLNAAYPSSRGIYLREATAFQQSTELGLSLDQGKGADGAAAPGVGFLKPPEEASGSGKHFRDDVLDARAKNVFHGQPMPTTIPAAPHPPTMRPRVRARRGQATDPHXIAERLRKERIAERIRALQELVPSVNKVCNCSNAPILAKMEAEKRSLWSWTASLEKRSLFPNAKSVALGAEKRSL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0386 187 Gene3D - 100 168 IPR036638 GO:0046983
Amo15g0386 187 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 159 IPR011598 GO:0046983
Amo15g0386 187 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 140 - -
Amo15g0386 187 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 105 151 IPR036638 GO:0046983
Amo15g0386 187 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 24 140 - -
Amo15g0386 187 MobiDBLite consensus disorder prediction 46 65 - -
Amo15g0386 187 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0386 Amo-Chr15 17724398 17728925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0386 28 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 67.521 4.16e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0386 - - ahf:114924986 238.039