Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0374 ATGGATAAGAGCATGTTAGCTGGTTTGGAATCACTTCCAGAAGCTTATCAGCAAAGAACGGTGCTAATCAATGCCACTGCTGATCGAAACTGCGCGACACTATCGCAGGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCACTGTCTCCTGTGAGAAGAACAAGAGAGGATTAAGGTTGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTAGACAGAAATCAATTGGTTGAATCTTTATTTGCGCTCAATGGGATAAGCCAAGAATTTGCTTCAATATATGTTCAATTCAGTCGCAGATGTTAG 345 0.4232 MDKSMLAGLESLPEAYQQRTVLINATADRNCATLSQEKFLQERIKVGGKAGALGDSVTVSCEKNKRGLRLIDEELLQEVVNMGLDRNQLVESLFALNGISQEFASIYVQFSRRC* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0374 114 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 70 111 IPR015940 -
Amo15g0374 114 Gene3D - 14 79 IPR038526 -
Amo15g0374 114 Pfam Ribosomal L22e protein family 31 65 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0374 Amo-Chr15 16592922 16594521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0374 35 65 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.871 7.47e-11 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0374 K02891 - qsu:111993050 56.9954