Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0342 ATGGGTTTGGGTGCTGAGAATGGTAAGGTGGTAGATTCTTGGGATGTGTGTAAATCAAAGCGGAAGAAGAAGAGTAAGAAATTGAAGCAGAAGGAAGGGGAGGTAGTGGTGGATGAGGAAGATGAGGAGTTTGAGGGAGAGACTGGGTGTTGGGTTAGGCTAAGGTTCATGGGGAGCTGCATTTCTTCAAGACCCAAAGTTGATAACTCAGTCAGTGGCACCACCACTCATGATGCTGAAAGTAAATCAACTAGTGATACAAGTAGAGACCAACGAAGCGAACCGACGGCCCCAGTAGTCTCATCTACGACCACTAGCAATGCAAGCAGTTCATCAACTTCTAAACTCGAAGAGGAGCTTAAAGTTGCCTCCAGGCTACGGAAGTTCTCTTTCAATGATCTTAAGTTGGCAACGAGAAATTTTCGGCCCGAGAGTCTTCTTGGCGAAGGTGGGTTTGGTTGCGTATTCAAGGGATGGGTTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACCGTTGCCGTAAAAACCCTCAACCATGATGGGCTCCAAGGCCATAAAGAATGGCTGGCTGAAGTAAACTTTCTTGGTGATCTAGTCCATCCACACCTTGTTAAGCTTATAGGGTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGAAGCCTAGAAAATCACTTATTTAGGAGATCCATGCCTCTTCCATGGTCCGTTAGGTTGAAAATTGCACTAGGAGCAGCTAAGGGTCTTGCTTTTCTTCACGAAGAAGCTGAACGACCAGTAATATATAGAGATTTTAAAACTTCAAATATATTATTAGATGCAGAATACAACGCCAAGCTCTCAGACTTTGGACTTGCCAAAGATGGTCCAGAAGGAGATAAAACCCATGTGTCTACCCGAGTGATGGGAACCTATGGTTATGCAGCACCGGAGTATGTCATGACAGGTCATCTTACATCAAGAAGTGACGTGTATAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGAAGAAGATCTATGGACAAACACCGTCCCAATGGCGAACATAACCTTGTGGAATGGGCTCGGCCGCATCTGGGAGAGAAGAGAAGGTTCTATAGGCTGTTGGACCCTCGCCTTGAAGGCCATTTCTCCATAAAAGGAGCTCAAAAAGCTGCCCAAATTGCCGCTCGCTGTCTTAGTAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTAGAAGATCTAAAGCCTCTGCTAAGTCTTAGGGACATGGCAAGCTCTTCATATTACTTCCAATCGATGCAAGCTGACCGCTTTAGCCCTAGTCCAAATACCCGAAATGGGCGGACACAAGGAGTGTTCCTCGCCCGGAATGCGCAGAGGAGTCTTTCAATACCCCATGGTATCCATGCCTCTCCATATCACCATCAGTTTCTGCAACAATCACCAAAACCTAATGGCAAAACATAA 1488 0.4603 MGLGAENGKVVDSWDVCKSKRKKKSKKLKQKEGEVVVDEEDEEFEGETGCWVRLRFMGSCISSRPKVDNSVSGTTTHDAESKSTSDTSRDQRSEPTAPVVSSTTTSNASSSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSVRLKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGEKRRFYRLLDPRLEGHFSIKGAQKAAQIAARCLSRDPKARPLMSEVVEDLKPLLSLRDMASSSYYFQSMQADRFSPSPNTRNGRTQGVFLARNAQRSLSIPHGIHASPYHHQFLQQSPKPNGKT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0342 495 MobiDBLite consensus disorder prediction 65 116 - -
Amo15g0342 495 MobiDBLite consensus disorder prediction 65 81 - -
Amo15g0342 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Amo15g0342 495 MobiDBLite consensus disorder prediction 19 46 - -
Amo15g0342 495 ProSitePatterns Protein kinases ATP-binding region signature. 147 179 IPR017441 GO:0005524
Amo15g0342 495 CDD STKc_IRAK 147 424 - -
Amo15g0342 495 Gene3D Transferase(Phosphotransferase) domain 1 227 441 - -
Amo15g0342 495 Pfam Protein tyrosine and serine/threonine kinase 145 421 IPR001245 GO:0004672|GO:0006468
Amo15g0342 495 SUPERFAMILY Protein kinase-like (PK-like) 127 446 IPR011009 -
Amo15g0342 495 Gene3D Phosphorylase Kinase; domain 1 100 226 - -
Amo15g0342 495 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 75 485 - -
Amo15g0342 495 MobiDBLite consensus disorder prediction 90 116 - -
Amo15g0342 495 ProSiteProfiles Protein kinase domain profile. 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0342 495 PANTHER OS01G0588500 PROTEIN-RELATED 75 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0342 Amo-Chr15 13847343 13851135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0342 127 421 Glycoside Hydrolase AT3G07070 59.060 3.38e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo15g0342 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0342 - - gmx:100787151 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0342 15 13847343 13851135 Amo15g0342 15 13847343 13851135 ECH