Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0262 ATGTCGCCGGAAAGTGACATCACGATGCCATCTCCGGCATCTTTCCGTCTCCGGTGGGATGTGTTCCTGAGCTTCCGCGGCTCCGACACCAGGGAGGCCTTCACGGAGGACCTCCACGGCGCTCTCGAAGCCGCTGGCGTGCGCGCCTTCATCGACAACGAAGGATTACAGCGTGGCGACTCGATCTCGCCGAGTCTGGTGGAAGCAATCGCGGATTCCGCCGCCGCCATTGTTATTCTCTCGCCCGACTACGCTTCCTCGCACTGGTGCCTTGAGGAGCTGGCGAAGATCTGCGAGTGCGGTTGGAAGCTGGTGCTGCCCGTTTTCTACCGGGTTGACCCGTCTCATGTCCGAAAACAGAAGGGACCTTTCGAGAAGGCGTTTCGGTTGCACGAAGAGAGTGAGAGGTTTAGGAATAAGGTTGCCAGTTGGAGGAGTGCTATGAACAAAGTTGGTGGAATTGCTGGTTGGGTTTTTGGTGATCATAATAGCAACAAGGATCAGTTAATTCGAGTTTTGGTGCAAACGGTCTTGAAGCAGATGAGGAATACTCCATTGACAGTGGCACAGTATACAGTTGGGCTTGATGACAGAGTTGCAGAGTTAAGGAAGTTAGTTGACGTAAGATCCAGTGATGTCAAAGTGATAGGATTGTATGGAATGGGAGGGGTCGGTAAGACAACTCTGGCCAAGGGACTCTTCAACAGCCTTGTTGATCATTTTGATAGACGCAGCTTCATCTCAAATGTTAGAGAAGTTGCAAACAATGAAGATGGTATGGTTTCACTCCAGGGAAGAATTCTTGGTGATCTTTCCCCTGGAACTGAGAATCCCATCAATGATGTTAATGCTGGTATTTCTGCGATCAAAAGAATTGTAGAGGAAAATCGAGTTCTGGTTTTTCTTGATGATGTTGATGATGTAAAACAGCTTGACTCATTAATTGGTAAGAGAGAATGGTTTTCTAAAGGAAGCTGTGTTGTGATTACTACACGGGACAGAGCCGTTTTACAGGAGAGGTATGTTAATGTGAAGTATGAGGTGAAGGAATTGAAAGTGTCTCAAGCACTGGAATTGTTCTGTTACCATTCCATGAGAAGAAAGGTTCCTGCTGATGGTTTTCTCAATCTCTCTGAACAAATTGTGTCTCTTACAGGAGGATTGCCTCTGGCTTTGGAAGTTTTCGGCTCATTCTTATTCGATAAGAGGACGATTAACGAATGGAAAGACACAGTGTTGAAGCTTAAAGATATTCGGCCGGATAAACTTCAAGGTGCTCTGAAGATCAGCTTTGATGCCTTGGATGAACAAGACAAGTGTGTGTTCCTTGACATTGCTTGCTTGTTTGTGCAAATGGAAATGAAGAGGGATGATGTGGTTGATATACTGAATGGTTGTGGTTTTAGAGGGGAGATTGCAATAACGGTCTTAACTACAAAGTGTTTAATTAAGATCATTAAGGATGGTGTAGTGTGGATGCATGATCAGGTTAGAGACATGGGAAGGCAAATTGTTCAAAATCAAAGTATTCTAGATTGTGGTTCACGTAGCAGGTTATGGGATCGTCATGAAATCTTGGGTGTCTTGAAGAATAAGAAGGGAACAAGAAAAGTTGAAGGTATTGTCCTTGATTGTGTAAAGAGGAGTCTGGCTAAACCTAGAGACCGTACTGCTGAAGAGATTACCTGGGACAATTTTCGACAAATGCCAGGTTACAAAACAGCATCAGCATATATGAAGGCAAAGTATAAGAAATATGTGGAGCATAGAGGAGAGAAAGCAAAAAAATTTACACTTGATACAAAGGACTTCCAACCTATGGTTTCCTTAAGGTTGCTTCAAATTAATTATTCAAGACTTGAAGGACAGGGCAAATTTCTGCCTCAAGGAGTAAAGTGGTTACAATGGAAACAATGTCCTCTAAAGAACATGTCTTCTTCCTATTATCCATTGGAACTTGCCGTGCTTGATCTCTCGGAAAGCAAGATTGAAACACTGGGGGGAAAGCATCATAACAAGGTAGCTGAGTGCCTGATGGTTTTAAACCTCTCCAGTTGCCACCATTTAGTTGCAATTCCGGATTTAACTGGTTACCATTGTCTAAAAAAGATTATATTGGAGAACTGCACTGCTTTAACTAGGATTCATGAATCAGTTGGAAATTTAAGTACCCTGGTTCACTTGAACTTAGGCGCATGCCATAACCTTGTTGAGTTACCTAGTGATGTCTCTGGGTTGAAACATCTCGAGGACTTGATTCTTTCTGGATGTTGGAAATTGAAAGCATTACCAAAGGACCTAAGCTGCTTGGTCTCTTTAAGAAAGCTTCTCATTGATGAGACTGCCATAACTGTGTTACCTGATTCCATCTTCCACCTCACCAAACTGGAAAAGTTGAGTTGCAGTGGTTGCCGTCTTTTGAGAAGGATACCCACCTGCATTGGGAAACTCTGTTCTCTGCGAGAATTATCACTAAACCATACAGCTTTGGATGAATTGCCTGATTCTATTGGATCTTTGCAGAATCTTGAGAAACTTGGTTTGGTTGGGTGTAAGTCCCTCTCTATTATTCCAGATTCTGTTGGGACACTAATTTCATTGACACACTTGTTTTTGGATGTCAGTGGAATCAAAGAGTTGCCTGATTCTATTGGTTCTTTATCATATCTAAGGCAATTGTCTGTTAGTGGCTGCACTTCTCTTGGTGAATTGCCTATGTCAATAAAGGCTTTAGTCTCTCTTGTTGAGCTTCATTTAGATAAGACACCAATTACTATTTTGCCAGAACATATAGGGGCCATGAAAATGCTACAAAAGCTTGGGATGGCGAATTGTAAAGATCTCAAGTTTCTACCTGCATCGATTGGAGACATGTCGGCCCTTACTACCTTGGACATGTATAACACTAATATTACTGAATTGCCAGAGTCAATTGGAATGTTGGAAAATCTTATTCATTTAAGGCTAGACATGTGCAAAGAGCTCAAAAGGCTTCCAAAATCCTTGGGAAATTTGAAATCTCTATGCTGGTTACGGATGAAGGAAACAGCAGTTACACAGCTACCTGATAGCTTTGGGATGCTTTCAAGATTGGTAAAATTAGACATGGAAAGAAGGTATTACCTCAATATGGTTGGAGACAAGAATACCGAAGAACCCAATTCAGTTGGAATCTTAAGAGGTTTTTGTAAACTAACTTTGTTGCAAGAGCTAAATGCACATGGATGGAGAATAGCTGGAAAAATCCCAGATGACTTTGAAAAGTTGTCATCACTAGAAACTCTAAATTTATGCCAGAATAATATTATCAGCCTTCCAGCCAGCATGAGAGGCCTTTCCTGTCTAAAAAAGCTTTTGTTGTCAAATTGCACTCAGCTCATTTTTCTGCCATCTCTTCCCTCTAGCTTAGTAGAGGTCGATGTTGCGAACTGTATTGCATTAGAGCGCATATCTGATATTTCAAACTTAGATAACATAGAGGAGTTGAACCTTACAAATTGTGAAAAGCTGGAAGACATACCAGGTATTGAGCACTTAAAGTCCTTGAGAAGATTGTACATGAGTGGATGCATTGGATGCTCCCATGCTGTGATGAGAAGATTTTCCAAGGCTCTGCTTAAAAATTTACGGATTTTGATTATGCCTGGAAGCAAAGATATTCCAGATTGGATTTCAGGAGAATCAATTATCTTTTCCAAGAGAACAAACCGTGAGCTTAAGGGTATTATTTGTGCCGGTGTACTCTCTTTCGACGGTATACCTGAAAACCAAAGAGATGCCTTGCAGTTAGTGGATGTTCAGGCAAAAGTCTTCAATTTGACTGATAATGTATATAGCACTACGTTTCGCCTGTTAGGTGTACCTAGGACAAATGAAGACCACATCTTCTTGCACAGATTTGGAGCTCATACTTCATTGGTTCACCAGTTGAAAGATAAATACACCTTGCATTTGACAAAGCGGAATGCACCCTTTGTTCAGGAATTGAAGCTGAAGAACTGCGGAATTCATTTGGTCTTCGAAGGTGATGATGACTATGAAGGAGATGAAGATTCGCTAGATGAAAGCCAATATTCGGTGTCACAAAAATTAGCCAAGTTCTTCAACTCTTGTTATTGCCCGAGATCGCCTTTGCATGTGAATACAAGTACGTCAAATGAACCACTTGAGATCGGGAGGAGTATAACAAGAAGCACAGTTCCAGACCCATGGCTTCGTTCCATCTTTTTTAGTGCGATATTTTTGTGTGCTTTGAGCTATTTATACTTCAGATACCTCAATTTTTGA 4287 0.4185 MSPESDITMPSPASFRLRWDVFLSFRGSDTREAFTEDLHGALEAAGVRAFIDNEGLQRGDSISPSLVEAIADSAAAIVILSPDYASSHWCLEELAKICECGWKLVLPVFYRVDPSHVRKQKGPFEKAFRLHEESERFRNKVASWRSAMNKVGGIAGWVFGDHNSNKDQLIRVLVQTVLKQMRNTPLTVAQYTVGLDDRVAELRKLVDVRSSDVKVIGLYGMGGVGKTTLAKGLFNSLVDHFDRRSFISNVREVANNEDGMVSLQGRILGDLSPGTENPINDVNAGISAIKRIVEENRVLVFLDDVDDVKQLDSLIGKREWFSKGSCVVITTRDRAVLQERYVNVKYEVKELKVSQALELFCYHSMRRKVPADGFLNLSEQIVSLTGGLPLALEVFGSFLFDKRTINEWKDTVLKLKDIRPDKLQGALKISFDALDEQDKCVFLDIACLFVQMEMKRDDVVDILNGCGFRGEIAITVLTTKCLIKIIKDGVVWMHDQVRDMGRQIVQNQSILDCGSRSRLWDRHEILGVLKNKKGTRKVEGIVLDCVKRSLAKPRDRTAEEITWDNFRQMPGYKTASAYMKAKYKKYVEHRGEKAKKFTLDTKDFQPMVSLRLLQINYSRLEGQGKFLPQGVKWLQWKQCPLKNMSSSYYPLELAVLDLSESKIETLGGKHHNKVAECLMVLNLSSCHHLVAIPDLTGYHCLKKIILENCTALTRIHESVGNLSTLVHLNLGACHNLVELPSDVSGLKHLEDLILSGCWKLKALPKDLSCLVSLRKLLIDETAITVLPDSIFHLTKLEKLSCSGCRLLRRIPTCIGKLCSLRELSLNHTALDELPDSIGSLQNLEKLGLVGCKSLSIIPDSVGTLISLTHLFLDVSGIKELPDSIGSLSYLRQLSVSGCTSLGELPMSIKALVSLVELHLDKTPITILPEHIGAMKMLQKLGMANCKDLKFLPASIGDMSALTTLDMYNTNITELPESIGMLENLIHLRLDMCKELKRLPKSLGNLKSLCWLRMKETAVTQLPDSFGMLSRLVKLDMERRYYLNMVGDKNTEEPNSVGILRGFCKLTLLQELNAHGWRIAGKIPDDFEKLSSLETLNLCQNNIISLPASMRGLSCLKKLLLSNCTQLIFLPSLPSSLVEVDVANCIALERISDISNLDNIEELNLTNCEKLEDIPGIEHLKSLRRLYMSGCIGCSHAVMRRFSKALLKNLRILIMPGSKDIPDWISGESIIFSKRTNRELKGIICAGVLSFDGIPENQRDALQLVDVQAKVFNLTDNVYSTTFRLLGVPRTNEDHIFLHRFGAHTSLVHQLKDKYTLHLTKRNAPFVQELKLKNCGIHLVFEGDDDYEGDEDSLDESQYSVSQKLAKFFNSCYCPRSPLHVNTSTSNEPLEIGRSITRSTVPDPWLRSIFFSAIFLCALSYLYFRYLNF* 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0262 1428 Pfam NB-ARC domain 204 417 IPR002182 GO:0043531
Amo15g0262 1428 Gene3D Ribonuclease Inhibitor 880 1050 IPR032675 -
Amo15g0262 1428 Gene3D Ribonuclease Inhibitor 1051 1228 IPR032675 -
Amo15g0262 1428 Gene3D Ribonuclease Inhibitor 596 785 IPR032675 -
Amo15g0262 1428 SMART LRR_typ_2 817 840 IPR003591 -
Amo15g0262 1428 SMART LRR_typ_2 911 934 IPR003591 -
Amo15g0262 1428 SMART LRR_typ_2 770 793 IPR003591 -
Amo15g0262 1428 SMART LRR_typ_2 864 887 IPR003591 -
Amo15g0262 1428 SMART LRR_typ_2 1089 1112 IPR003591 -
Amo15g0262 1428 SMART LRR_typ_2 958 981 IPR003591 -
Amo15g0262 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Amo15g0262 1428 Gene3D Ribonuclease Inhibitor 786 879 IPR032675 -
Amo15g0262 1428 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Amo15g0262 1428 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1329 IPR044974 GO:0006952
Amo15g0262 1428 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Amo15g0262 1428 Gene3D - 351 435 IPR042197 -
Amo15g0262 1428 Gene3D - 181 346 IPR027417 -
Amo15g0262 1428 SUPERFAMILY L domain-like 911 1215 - -
Amo15g0262 1428 SUPERFAMILY L domain-like 493 946 - -
Amo15g0262 1428 Gene3D - 14 180 IPR035897 -
Amo15g0262 1428 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 1329 - -
Amo15g0262 1428 Pfam TIR domain 19 183 IPR000157 GO:0007165
Amo15g0262 1428 PRINTS Disease resistance protein signature 292 306 - -
Amo15g0262 1428 PRINTS Disease resistance protein signature 838 854 - -
Amo15g0262 1428 PRINTS Disease resistance protein signature 385 399 - -
Amo15g0262 1428 PRINTS Disease resistance protein signature 215 230 - -
Amo15g0262 1428 SMART till_3 18 154 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0262 Amo-Chr15 9713442 9722360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0262 19 893 WRKY Transcription Factor Family AT4G12020 27.609 3.43e-72 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0262 - - adu:107489074 2655.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0262 15 9713442 9722360 Amo15g0262 15 9713442 9722360 ECH
Amo05g2813 05 73304041 73312005 Amo15g0262 15 9713442 9722360 hybridization
Amo05g1696 05 33508990 33520244 Amo15g0262 15 9713442 9722360 hybridization
Amo15g0262 15 9713442 9722360 Amo05g1697 05 33520565 33529399 PCT
Amo15g0262 15 9713442 9722360 Amo15g0261 15 9705647 9712990 PCT
Amo05g1696 05 33508990 33520244 Amo15g0262 15 9713442 9722360 PCT
Amo15g0262 15 9713442 9722360 Amo05g2813 05 73304041 73312005 PCT
Amo15g0262 15 9713442 9722360 Amo15g0262 15 9713442 9722360 PCT