Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0220 ATGCATGACAATGATCCTTTCACCAAAGCTCTTTCATTAGCAGGTGCTCAAGTGTTTCCTGCAATCTTGAACGCTGCTGTTGATATGAACTTGTTTGAGATCATAGCAAAGGCAGAGACTTCGCTGGGGATGTGTGCATCTGAAATTGCGTCCAAGCTTCCAAACCAACACTCTGATATGGCCAACAGGCTTGAACGCATGCTGCCATTGTTGGCGGTACATTCTCTTCTCACTTGCTCCATTCGCACCAATCAAGATGGTGACACAGAGAAGGTTTATGCTCTCTCCCCTGTTGGACAATACTTTACACGTAATGATCAACAAGGAAGTTCCTTGGCTGCATTGAAAGATACAAAAGATGCAATATTAGACGCTAACAATCACAACCATTTCCAAAAAGTGTATGGAAAGTTAGCATTTGAATATATGGAGACAGATAGAGAGTTCGGTAACCTTTTCGGGCAAGCAATGTCTCAAGCTGGACCTCTGGTAATGAAATCAATCCTTGATTCATATAAAGGCTTTGAGGGAATATCAACGTTAGTTGATGTCGGAGGTGGATATGGACAAGCCCTGAAACAAATTCTCTTTCACTATCCATCAATTAAAGGAATTAATTTTGATTTACCTCACGTTGTGGAAAACGCACCTCCAGGTACGTAA 663 0.4178 MHDNDPFTKALSLAGAQVFPAILNAAVDMNLFEIIAKAETSLGMCASEIASKLPNQHSDMANRLERMLPLLAVHSLLTCSIRTNQDGDTEKVYALSPVGQYFTRNDQQGSSLAALKDTKDAILDANNHNHFQKVYGKLAFEYMETDREFGNLFGQAMSQAGPLVMKSILDSYKGFEGISTLVDVGGGYGQALKQILFHYPSIKGINFDLPHVVENAPPGT* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0220 220 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 220 IPR016461 GO:0008168
Amo15g0220 220 PANTHER O-METHYLTRANSFERASE 8 219 IPR016461 GO:0008168
Amo15g0220 220 Pfam Dimerisation domain 22 72 IPR012967 GO:0046983
Amo15g0220 220 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 217 IPR029063 -
Amo15g0220 220 Gene3D Vaccinia Virus protein VP39 102 219 IPR029063 -
Amo15g0220 220 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 219 - -
Amo15g0220 220 SUPERFAMILY "Winged helix" DNA-binding domain 5 106 IPR036390 -
Amo15g0220 220 Pfam O-methyltransferase domain 117 217 IPR001077 GO:0008171
Amo15g0220 220 Gene3D - 1 101 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0220 Amo-Chr15 8014076 8015214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0220 3 219 Monolignol Biosynthesis Gene Families AT5G54160 45.259 4.32e-56 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0220 K13066 - gmx:100779492 258.84