Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0218 ATGGATGATTCAAGCTCAGATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTCCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTATAGGAACTATGCCAAGGCTGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCTGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAATGAGGAGGCC 450 0.4267 MDDSSSDCQLNQGEVDYEFESNEVPEPLSVVDDQFVPKVGMTFTTLEDAGKFYRNYAKAGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0218 150 Pfam FAR1 DNA-binding domain 57 123 IPR004330 -
Amo15g0218 150 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 60 136 - -
Amo15g0218 150 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 60 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0218 Amo-Chr15 7994496 7995427 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g0218 FAR1 1.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0218 - - adu:110278638 283.878