Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0201 ATGGGAGAATTCAGAGTGAGTGTGATCAAAGAGGAAGTGGTGGCAGCCATGCTTCCCATGCAAGACCATTGGTTGCCATTCTCAAACCTTGACCTCCTTCTTCCACCGATTGATGCTAGCGTCTTCTTTTGCTACAATAACACCGCAATGCTGAGCTTTGGATCAATGGTGGAGTCACTTAAGAATTCACTAGCTAAGGCTTTGGTTCCCTATTATGCTTTTGGTGGTGAGGTGGTGCAAAACTCCATGGGTGAACCTGAGCTTCTTTGCAATAACCGTGGGGTTGATTTTGTTGTGGCTGAGGCTGATGTTGAACTTCAGAGTCTTAACTTGTATAACCCTGATGAATCTGTTGAAGGAAAGCTTGTTCCAAAGAAGAAGCGTGGCGTGCTTGCTGTTCAGGTAACTTGGCTAAAGTGTGGTGGATTAGTAGTAGGATGCACTTCTGACCATCGAATCGCAGATGCTTACAGTACAAACATATTTCTTGTATCGTGGGCCCAGTTGGCCCAATCGACAGGGCTCACTACCTTAACTCATCAACCTTGTTTTCGCCGCTCCCTCCTCAGTCCAAGACGCCCCCCAACTATCCACCCTTCAGCTTCAATTGACCGCATGTATGTTCTCCTCACCGACCACCTTCCTCCACCAGCTGAGCCCAATCCCAGTTCCGATCCCGGCCCAATCATCAGCCGCATATATTTCATCACTGTTGAAGAACTTAACCGCATTCAGGCACTTGCAACCTCAAACGGTGCCAAGCCCACAAAGCTTGTATCCTTCTCTGCATTCTTGTGGAAATTGGTTGCTACGGCTTCTGTTTCATCCAAAGCTATTATTGATGGTTATAATAACAAAAAGGCGATCGTTGCTAAGATGGGTATTGTGGTTGATGGAAGAAGAAGGCTGAGCAATGGCGACAAGAAAAAGGAAGCACTAATGAATTGTTACTTTGGCAACGTGGTTTCCATTCCATTTGATGGGGAACCAGTGGAGAAGTTAGTGGAAAAGACACTGAGCCAGGTGGCCGAGCAGGTTCACGAGTTCCTAGAGGTGGCAACAACGGAAGAACACTTCTTAGGGCTCAATGACTGGGTTGAAATACACCGCCCCGTACCGGCGGTGACCAGGATCTTTCATGAAACGTATGATGGGCCGTGTTTTGTGGTGTCTTCGGGAAGAAGGTTTCTTGAGTCAAAGGTTGATTTTGGCTGGGGAAAGCCAATATTTGAATCATGCCATTTTCCATGGGGTGGTCGTTGTGGTTATGTGATGCCATTGCCTAGCCCTAAAGGGAATGGCGATTGGGTGCTCTATATGCACCTTCACAAGAACCACTTGGAATTCATGGAGTCTCATTATTCTCATATATTTAGGCCTTTATCTTGGGATTACCTTTCCAACCAAATATGA 1413 0.4657 MGEFRVSVIKEEVVAAMLPMQDHWLPFSNLDLLLPPIDASVFFCYNNTAMLSFGSMVESLKNSLAKALVPYYAFGGEVVQNSMGEPELLCNNRGVDFVVAEADVELQSLNLYNPDESVEGKLVPKKKRGVLAVQVTWLKCGGLVVGCTSDHRIADAYSTNIFLVSWAQLAQSTGLTTLTHQPCFRRSLLSPRRPPTIHPSASIDRMYVLLTDHLPPPAEPNPSSDPGPIISRIYFITVEELNRIQALATSNGAKPTKLVSFSAFLWKLVATASVSSKAIIDGYNNKKAIVAKMGIVVDGRRRLSNGDKKKEALMNCYFGNVVSIPFDGEPVEKLVEKTLSQVAEQVHEFLEVATTEEHFLGLNDWVEIHRPVPAVTRIFHETYDGPCFVVSSGRRFLESKVDFGWGKPIFESCHFPWGGRCGYVMPLPSPKGNGDWVLYMHLHKNHLEFMESHYSHIFRPLSWDYLSNQI* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0201 470 Pfam Transferase family 5 456 - -
Amo15g0201 470 Gene3D - 215 455 IPR023213 -
Amo15g0201 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 462 - -
Amo15g0201 470 Gene3D - 3 202 IPR023213 -
Amo15g0201 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0201 Amo-Chr15 7363780 7366955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0201 15 451 Monolignol Biosynthesis Gene Families AT5G48930 28.125 2.38e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0201 - - ahf:112746934 949.503