Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0168 ATGGCTTCGAAGGAGATTGAGAAGGAGATCCCAACATACATCACTCTGTACAAAGACGGAACAGTAGATCGGCCACGACAAACCCCATACGCGGCACCCTCTCTTGATGGAACTCCTCATGTCTCATCCAAAGACATAATCATCTCACAAAACCCATCCATCTCTGCGCGTCTCTACCTTCCAAAACCCCTTCCTCAAACCCACAAACTCCCAATCTTGGTCTACTTCCATGGCGGTGGCTTCTTCTTCGAATCCGCCTTCTCTGAACTCTACCACAACTACTTCAACACCTTCGTCTCTCGACTCCCCGTGCTAGTGGTTTCCGTCGAGTACAGACTCGCCCCGGAGCACTATCTCCCCGCCGCTTACGATGATTGCTTCGCCGCTCTTCAGTGGGTCGCTTCTCACTCCTCTAATAACACTACTGAGCCATGGCTGATCGATTACGGTGACTTCTCCAGAATCTTCATAGGCGGCGACAGTGCTGGTGGCAACATCGTGCATAACGTGGCCATGCGCGCTGGTTCTGAAGCTCTAGAAGAGGGTGGCAATGTGAATCTTCTAGGCGCTATTTATGTGCACCCTTACTTCTACAGTTCAGAGGCAATTGGATCTGAGTCTGTGAGCGAGCATGAAAAGAGTTTGGGTTATATTGTTTGGGATTTTGTTTACCCGAATGCGCCAGGTGGAATCAACAACCCTATGGTGAATCCCTTTGCTCCTGGGGCTCCCAGCTTGGCTAGCCTTGGGTGTTCTAAGATACTAGTGTGTCTCGCTGGCAATGATTCCATAAGGGACAGAGGGGTTTGGTTCTTTGAGGGTCTCAACAAGAGTGGGTGGAAAGGTAAATCGGAGCTCTTTGAAGAGGCAGGCGAGGACCATGTTTATCACATCTTCCATCCTGAAACTGAGAAAGCCAAGAAAATCACAGATCGCATGGCTTCTTTTATTTTAGATTGA 960 0.4938 MASKEIEKEIPTYITLYKDGTVDRPRQTPYAAPSLDGTPHVSSKDIIISQNPSISARLYLPKPLPQTHKLPILVYFHGGGFFFESAFSELYHNYFNTFVSRLPVLVVSVEYRLAPEHYLPAAYDDCFAALQWVASHSSNNTTEPWLIDYGDFSRIFIGGDSAGGNIVHNVAMRAGSEALEEGGNVNLLGAIYVHPYFYSSEAIGSESVSEHEKSLGYIVWDFVYPNAPGGINNPMVNPFAPGAPSLASLGCSKILVCLAGNDSIRDRGVWFFEGLNKSGWKGKSELFEEAGEDHVYHIFHPETEKAKKITDRMASFILD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0168 319 Pfam alpha/beta hydrolase fold 73 297 IPR013094 GO:0016787
Amo15g0168 319 Gene3D alpha/beta hydrolase 3 318 IPR029058 -
Amo15g0168 319 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 4 318 - -
Amo15g0168 319 SUPERFAMILY alpha/beta-Hydrolases 19 317 IPR029058 -
Amo15g0168 319 PANTHER ARYLACETAMIDE DEACETYLASE 4 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0168 Amo-Chr15 6501033 6502290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0168 5 317 Carbohydrate Esterase AT3G48700 37.578 1.71e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0168 - - adu:110281005 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0168 15 6501033 6502290 Amo15g0168 15 6501033 6502290 ECH
Amo05g2154 05 46847981 46849273 Amo15g0168 15 6501033 6502290 hybridization
Amo15g0168 15 6501033 6502290 Amo19g4303 19 159743397 159744440 PCT
Amo19g4304 19 159745018 159746010 Amo15g0168 15 6501033 6502290 PCT