Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0121 ATGGCGACGCGAGTGGGAGTGAGCATAACCGCCGCAATGATCTCAGTTCAGTTCTTGGAGGTGGGATTGAACACTCTGGTGAAATCCGCCAATACCAATGGAATGAGCAACTATGTCTTCATTCTTTACTCCAACCTTCTCGCATTCTTCTTCCTTCTCCCGTCCACTTTCTTCTTTTACAGAAATGCCCCTCCTCCTCCTCCTATACCCACCTCTGTCCTCTCTAGAATTTTACTCCTTAGTTGTCTCAGTACTACGGTGCAGACCCTGATGTACACCGGTATTGGATACAGTTCTCCTACTCTGGCCTCTGCCATGGTGGATCTTATCCCTGCTTTCACTTTCATTATTGCCATTTTCTCCAGGATGGAAAATCTGAATATGAAACGACATAGCAGCTATGCAAAAATTATTGGGACAGTGGTTTCCATTGCAGGGGCATTAATCGTTACCTTATATAAAGGGTTGCCAATAACATTAAGTGGTACTAGTGGTTCCTTGCCAAATAAAATTGGAACTAATTATCTCTCAGCAGAAGCAAACTCAAACTGGATTCTAGGTGGTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCAATCTTGATTGTTGTTCAGACATGGATTATCAAGGATTATCCTGAAGAATTTGTAGTAACAACCACAGCTTGCGGTTTTGTTGTAGTCCTATCCGCCATAGTAGCCTTGTTTGCAGAGCATAATAAAAAAGCTTGGATACTTAAGCCTGATATGGAATTGGTATCCATATTTTATTCGGCAATTTTTGTGGTATCAATACGAAGCGTGGTGACAACATGGGCATGCCGTAAGAAAGGGCCAGTGTATGTGGCCATGTTCAATCCTTTAGCAATGGTCGTTGCTATTGCTATGGGTATAACATTTCTTGGTGACACTCTTTATCTTGGAAGCGTGATTGGTGCTGTTGCAATAGCTATAGGATTCTATTCTGTGATGTGGGCAATGGCTCAAGAGGAAAATATGGTAAAAAACAATCAATTTGTTCCATCTTCAACAGCACCTCTGTTGCCCAGAAAGAGCACGGATTGTACATAA 1071 0.4211 MATRVGVSITAAMISVQFLEVGLNTLVKSANTNGMSNYVFILYSNLLAFFFLLPSTFFFYRNAPPPPPIPTSVLSRILLLSCLSTTVQTLMYTGIGYSSPTLASAMVDLIPAFTFIIAIFSRMENLNMKRHSSYAKIIGTVVSIAGALIVTLYKGLPITLSGTSGSLPNKIGTNYLSAEANSNWILGGFLLATASFCLSILIVVQTWIIKDYPEEFVVTTTACGFVVVLSAIVALFAEHNKKAWILKPDMELVSIFYSAIFVVSIRSVVTTWACRKKGPVYVAMFNPLAMVVAIAMGITFLGDTLYLGSVIGAVAIAIGFYSVMWAMAQEENMVKNNQFVPSSTAPLLPRKSTDCT* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0121 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 325 - -
Amo15g0121 356 PANTHER WAT1-RELATED PROTEIN 16 329 IPR030184 GO:0016021|GO:0022857
Amo15g0121 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Amo15g0121 356 Pfam EamA-like transporter family 21 151 IPR000620 GO:0016020|GO:0016021
Amo15g0121 356 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020|GO:0016021
Amo15g0121 356 PANTHER WAT1-RELATED PROTEIN 16 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0121 Amo-Chr15 4621561 4625109 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0121 12 338 Nodulin-like Gene Family AT3G28050 46.646 3.98e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0121 - - gmx:100793168 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1848 05 38534869 38538547 Amo15g0121 15 4621561 4625109 hybridization