Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0119 ATGCCATTTGGTCTGGTTTCAGCCTGGAACAAGCGCCGTCGAAGCAAGTCCGAAGATCATACTGACCCTTGGGTTTATAGACCTGCGGAGTGCTGGCAACTCGAAGAACAAGTGACACGGCCTGCGAAAAGACTGCATGGATCAGCTGTGTTCACTCTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGACAATCTGCTAGGGAAAGGAGGATTCGGCAAAGTGTACCGCGGCATTTTACGGTCGGGAGAGGTCGTCGCAATCAAGAAGATGGCGCTGCCAGCAATTAAAGAAGCCGAGGGGGAACGTGAGTTCCGAGTTGAAGTGGACATCTTGAGCAGACTCGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAACATAGATTCCTAGTATATGAATACATGCATAATGGAAACCTGCAAGATCATTTGAATGGAATTGGAGAAKGAAAAATGGATTGGCCCCTAAGACTCAAAGTGGCACTAGGAGCTGCAAAAGGCCTTGCTTATCTCCACTCAAGTTCTGATGTTGGAATTCCCATTGTTCATAGAGATTTCAAATCAACCAATATTCTCTTAGATGCTAACTTTGATGCAAAGATATCTGACTTTGGGCTTGCCAAGTTAATGCCAGAAGGTCAAGAGACACATGTCACGGCCAGAGTTCTTGGKACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGGAAACTTACTCTGCAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAACTTTTGACTGGACGCCGAGCAGTTGATCTAAACCAAGGTCCCAATGATCAGAACCTTGTACTACAGGTGAGGCATATTCTGAATGATCGAAAGAAGCTGCGTAAGGTCATAGATCCAGAGATTGCCCGAAATTCTTACACTATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGCGTCCGAACTGATAGTAATGAGAGACCTTCAATGGCAGAATGTGTACAGGAACTCCTAATGATTATCTATACAAATTCAAAAGCTGGCATGGTTCAAGAAATTCCATATGCCATATTGTTCTAA 1089 0.4399 MPFGLVSAWNKRRRSKSEDHTDPWVYRPAECWQLEEQVTRPAKRLHGSAVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGILRSGEVVAIKKMALPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGEXKMDWPLRLKVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDANFDAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEIARNSYTIQSIVMFANLASRCVRTDSNERPSMAECVQELLMIIYTNSKAGMVQEIPYAILF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0119 362 PANTHER OS01G0750732 PROTEIN 1 354 - -
Amo15g0119 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Amo15g0119 362 Gene3D Phosphorylase Kinase; domain 1 31 141 - -
Amo15g0119 362 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 354 - -
Amo15g0119 362 Pfam Protein kinase domain 64 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0119 362 Gene3D Transferase(Phosphotransferase) domain 1 142 355 - -
Amo15g0119 362 ProSiteProfiles Protein kinase domain profile. 63 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0119 362 CDD STKc_IRAK 69 340 - -
Amo15g0119 362 PIRSF ILK 33 355 - -
Amo15g0119 362 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Amo15g0119 362 SUPERFAMILY Protein kinase-like (PK-like) 50 349 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0119 Amo-Chr15 4543992 4546979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0119 46 344 Receptor kinase-like Gene Family AT3G58690 47.697 2.68e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Amo15g0119 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0119 - - gmx:100796654 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0119 15 4543992 4546979 Amo15g0119 15 4543992 4546979 ECH