Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0115 ATGGGGAATAAGAAGATAGCGCCATTTGTGGGAATGGTAATGGCTATGGTGTTGCAAAGTGGTAGCATGGTTGTTATCAAAGCAGCCATGAATGATGACTTCAACAAATATGTCTTGATTGTCTATTCTTTGGCACTCTCAACACTACTTCTTCTCCCCTTTCTCTTCCTTCTACCCAGGTCAGAGCGTCCTCCTCTGAGTTTCTCTACACTTTGCAGCCTATTTTTGCTTTCTTTGTGTGGAAGTTCAGGACAAATATTTGCATATGTGGGCATAGATCTCAGCTCACCAACTCTTGCCTCTGCCATGCTGAACCTCATTCCAGCTTTAACTTTTGTACTTGCACTTTTATTCAGGATGGAAAAAGTTGAATGGGGACATTTCAGCACCCAAGCTAAAGTCTTGGGAACAGTGGTATCAACTGGTGGAGCATTTGTTGTGATATTATATAAGGGCCCACCAATCTTCAAGGCACCCATCTCCTCGGTCTCTTCAATCCCGTTATCATTTTCACCTCATTTTAACTGGATCTTGGGAGGCTTTTTCTGTGTTGCTGATTCTTTGGTAGCTTCAGTCTGGTATATATATCAGGCATCAGTAATAAGGAATTACCCTGCAGTAATGGTGACAGTGTTCTTCCAACTCTTATTTTCAACCATTCAGTGCTCAATATTTGCATTAATTGCAGTAAGAGATCAAAGTGCATGGCAGCTGAACCTAGACACCGGGTTGATTGCAATCTTTTACCAGGCAATAGCTGCAACAACATTACGGTACCTGTTATGCACTTGGAGCGTCCAAAAAGCTGGACCATTTTTTTGTTCTATGTTCAAACCTATTTCAATCATCTTCACTGTTATCATGGGTGCTCTGTTCCTTGGAGATGACTTTTACCTTGGAAGCTTGATTGGTGCAGTTATAATCGTGGTAGGTTTTTATGGTGTAATGTGGGGAAAGGCCACAGAAGAGAAATGCATGATAATTGATGAAGAGAGGGTGACATCATATCATTCATTTATGGATATGGATGCATAA 1035 0.4126 MGNKKIAPFVGMVMAMVLQSGSMVVIKAAMNDDFNKYVLIVYSLALSTLLLLPFLFLLPRSERPPLSFSTLCSLFLLSLCGSSGQIFAYVGIDLSSPTLASAMLNLIPALTFVLALLFRMEKVEWGHFSTQAKVLGTVVSTGGAFVVILYKGPPIFKAPISSVSSIPLSFSPHFNWILGGFFCVADSLVASVWYIYQASVIRNYPAVMVTVFFQLLFSTIQCSIFALIAVRDQSAWQLNLDTGLIAIFYQAIAATTLRYLLCTWSVQKAGPFFCSMFKPISIIFTVIMGALFLGDDFYLGSLIGAVIIVVGFYGVMWGKATEEKCMIIDEERVTSYHSFMDMDA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0115 344 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020|GO:0016021
Amo15g0115 344 Pfam EamA-like transporter family 12 148 IPR000620 GO:0016020|GO:0016021
Amo15g0115 344 PANTHER WAT1-RELATED PROTEIN 7 329 IPR030184 GO:0016021|GO:0022857
Amo15g0115 344 PANTHER WAT1-RELATED PROTEIN 7 329 - -
Amo15g0115 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Amo15g0115 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0115 Amo-Chr15 4471360 4482470 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0115 3 323 Nodulin-like Gene Family AT5G40240 40.979 3.35e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0115 - - gmx:100792109 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1837 05 38318032 38325725 Amo15g0115 15 4471360 4482470 hybridization