Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0112 ATGAAGATTCCAGGAGTGACAACACTAATGGTAACAGTTCAGTGCTTGGAAGTGGGTTTGAACACATTAATCAAAGAAGCCACAGCCAAAGGAATGAGTGACTTTGTTTTTGTTGTGTATTCAAATGCCATGGCCCTCTGTTTCCTTCTACCTTCTGCCTTTATCTATTACAGAAAGAGAGGTTTCCTACCGATCACAAGGGGAGTTGTGTCCAGAATATTTCTTCTTAGCATGGTTAGCTGTTGTGAACAGACGTTGATGTATACTGGTATTGGATATAGCTCTCCTACATTGGCTTCAGCTATGGTGGATCTCACTCCAGCTTTTACCTATATTGTTGCTCTCATTTCCCGGTTGGAAAAGCTTAACATGAAACTACGGAGTGGCAAGGCAAAAAGCATTGGCACTGTGGTCTCAATTGTTGGGGCATTGGTGGTGACCCTACACGAAGGCTTCCCATTAACAAGTCACCGTGGTCCGCCACATAACATCGTCGTCTCGGGTGAAAACTTAATTCCAGAACCATCGGATTGGGTGCTCGGAGGCTTCCTTCTTTCGGCCGGAAGCTTCTGTCTTTCGCTCGTCTTCATTGTCAAGACATGGATTATCAAGGATTACCCCGAAGAGTTAATGGTAGCAACAATTTCTTGTAGTTTTGTGATCATCCTTTCAAGTATAGTAGCTCTCATTGTTGACTCAAGTGCACAAGCATGGTTGCTCAAACCTGATACAGAGTTGATAGCTATAGTGTATTCAGGAATATTTGTTGTGTCATTGCGTAGCATTGTGCATATATGGGCATGTAGAAAAAGAGGACCTGTGTATGTTGCTATGTTCAATCCTTTGGGGATGGTAATTTCACTTGCCATGGGGGTCACATTTCTTAAGGACACGCTCTATCTAGGAAGCATAATTGGAGCTGGTGTTATAGCTCTTGGGTTTTATGGCGTGATATGGGGGCAGGATCAAGAAGAAAAGATGGTAGATGAGAAAAATAATGGAAGATGTGACTCTGTGTTATCATCTTCTTCTACGGCTCCTTTGTTGCAGAACAAGAGCATTCATGTATAG 1071 0.4286 MKIPGVTTLMVTVQCLEVGLNTLIKEATAKGMSDFVFVVYSNAMALCFLLPSAFIYYRKRGFLPITRGVVSRIFLLSMVSCCEQTLMYTGIGYSSPTLASAMVDLTPAFTYIVALISRLEKLNMKLRSGKAKSIGTVVSIVGALVVTLHEGFPLTSHRGPPHNIVVSGENLIPEPSDWVLGGFLLSAGSFCLSLVFIVKTWIIKDYPEELMVATISCSFVIILSSIVALIVDSSAQAWLLKPDTELIAIVYSGIFVVSLRSIVHIWACRKRGPVYVAMFNPLGMVISLAMGVTFLKDTLYLGSIIGAGVIALGFYGVIWGQDQEEKMVDEKNNGRCDSVLSSSSTAPLLQNKSIHV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0112 356 Pfam EamA-like transporter family 181 318 IPR000620 GO:0016020|GO:0016021
Amo15g0112 356 Pfam EamA-like transporter family 18 147 IPR000620 GO:0016020|GO:0016021
Amo15g0112 356 PANTHER WAT1-RELATED PROTEIN 13 323 IPR030184 GO:0016021|GO:0022857
Amo15g0112 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Amo15g0112 356 PANTHER WAT1-RELATED PROTEIN 13 323 - -
Amo15g0112 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0112 Amo-Chr15 4306185 4315328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0112 8 351 Nodulin-like Gene Family AT3G28050 42.330 9.16e-90 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0112 - - qlo:115978999 412.535