Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0090 ATGACCCCTCTTGTTTCTAACAAAAAATTTGCAGCTCTTCACAAAGGCTCTCAAAATGCCACTGTCTATGCTTTTAGTGAGTGTATGAAAGATCTCTCTAAACCTGATTGTGATGTTTGCTTCTCTGAATCCAAAACAAAGATCTTAAGATGCTCGCCGTTTCAGAGGGGCACTATTGGTGGAAGACTATTCCTTGATGGGTGCTACATGAGGTATGATCATAAAAATTTCTTCAATGATAGTAGTGTTAGTGGTGAAGATAAAACTGTGTGTGGAACCAAGGATTTTGGTGGGGATAGGAGTGTTTACAAGGCTAATGCTATGGAACTGGTGAGGAATTTGAGCTTGGAAGCACAAAAGAAAAATAATGTTTGGTTCTTCCATGTTGGGTCTGTGAATCATAGGAATGTGAGTGTTTATGGTTTGGCTCAGTGCTGGAAATTTGTGAATGGAAGTGGATGCAAGACATGTTTGGATGAAGCTGTTACTAGGATTGAGTCATGTGCTTCAAAAGAAGAAGGAAGAGTGTTGAGTGTTGGTTGTTACTTGAGGTATTCAAGTAACAAGTTCTATAATGATAATTCAAGCAATGTTGTTGTCCCTTTCGGAAAACAAGGACATAGTAACCTTCCTCTGATTGTGGCTGCATCATCTTCTTCCTTGGCTCTGCTACTGATCGTTGTAACGGTTTCTTTCTTTGTAAGAATGAATATATTGAAGCAGAGAAGAGAAAGAAGAAAGTTTGGTGCGCTTTTGGAAACAGTGAACCAATCTAAACTAAATATGTCATATGAAGTTCTTGAACAAGCAACAAATTACTTCAATGTTTCCAATAAGCTAGGAGAAGGAGGAACAGGTTCAGTTTACAAAGGAGTTCTGCCAGATGGAAAGATTGTGGCCATAAAAAGGCTTAGCTTCATCACAACACAATGGGCAGATCATTTTTTCAATGAGGTGAATTTGATAAGTGGGATTCAACACAAAAATCTTGTAAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTACCTAATGGGAGCCTCTCTGATCACCTCTGTGTTAGAAAGAAATCTGAAGGGTTGAATTGGGAAGTGAGGCATAAGATCTTGTTAGGAACCGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACAAATGAGAATCATTCATAGAGATATAAAATTGGGAAATGTTCTACTTGATGAAAACTTCACACCCAAGATTGCTGATTTTGGACTTGTTAGATTGTTCCCTGAAGACAATTCTCACCTTAGCACAACCATTGCTGGTACACTGGGTTACATGGCACCAGAGTATGTAATTCTTGGGAAGTTAACTGAGAAAGCAGATGTCTACAGTTTCGGAGTGTTAGCCATTGAAATTGTATCCGGCAAAAAAATTAGGTCAATTGTTCAAAATTCAATCTCCCTTCTACACGAGGTTTGGAACCTGTATGAAACAAAGAAGGTATGTGAAATAGTTGATCTAAGCCTAGAGGGAAATTACCCTGCAGAGGAAGCATGTAAACTCCTTAAGATAGGGTTGCTTTGTGCACAAGCTTCTCCAGAGCTGAGACCATCAATGTCACAAGTTGTGAAAATGATTAAGGACAACAATCATGAACAGATTTCTGAACCAACACAGCCACCATTTCTAAACCGTTGCAGCGGCGAATTCAGCAGATCTATTTTAGATGCTGAAGATAGTTTTAATGCTGGATCCTACGCTCATCATCACTCTTCAGTCTATAACACGAGTGAAAATCTGACTCAACCTTTGTACATTTCAAATCGGAGTTCAGAATATTTTAGTGCATGA 1839 0.391 MTPLVSNKKFAALHKGSQNATVYAFSECMKDLSKPDCDVCFSESKTKILRCSPFQRGTIGGRLFLDGCYMRYDHKNFFNDSSVSGEDKTVCGTKDFGGDRSVYKANAMELVRNLSLEAQKKNNVWFFHVGSVNHRNVSVYGLAQCWKFVNGSGCKTCLDEAVTRIESCASKEEGRVLSVGCYLRYSSNKFYNDNSSNVVVPFGKQGHSNLPLIVAASSSSLALLLIVVTVSFFVRMNILKQRRERRKFGALLETVNQSKLNMSYEVLEQATNYFNVSNKLGEGGTGSVYKGVLPDGKIVAIKRLSFITTQWADHFFNEVNLISGIQHKNLVKLLGCSITGPESLLVYEYVPNGSLSDHLCVRKKSEGLNWEVRHKILLGTAEGLAYLHEESQMRIIHRDIKLGNVLLDENFTPKIADFGLVRLFPEDNSHLSTTIAGTLGYMAPEYVILGKLTEKADVYSFGVLAIEIVSGKKIRSIVQNSISLLHEVWNLYETKKVCEIVDLSLEGNYPAEEACKLLKIGLLCAQASPELRPSMSQVVKMIKDNNHEQISEPTQPPFLNRCSGEFSRSILDAEDSFNAGSYAHHHSSVYNTSENLTQPLYISNRSSEYFSA* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0090 612 Pfam Salt stress response/antifungal 9 74 IPR002902 -
Amo15g0090 612 Pfam Salt stress response/antifungal 96 187 IPR002902 -
Amo15g0090 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Amo15g0090 612 ProSiteProfiles Gnk2-homologous domain profile. 84 190 IPR002902 -
Amo15g0090 612 Gene3D Phosphorylase Kinase; domain 1 234 349 - -
Amo15g0090 612 SMART serkin_6 274 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0090 612 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Amo15g0090 612 CDD STKc_IRAK 280 543 - -
Amo15g0090 612 ProSiteProfiles Protein kinase domain profile. 274 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0090 612 Pfam Protein kinase domain 275 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g0090 612 Gene3D - 87 190 IPR038408 -
Amo15g0090 612 Gene3D - 3 77 IPR038408 -
Amo15g0090 612 Gene3D Transferase(Phosphotransferase) domain 1 350 556 - -
Amo15g0090 612 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 562 - -
Amo15g0090 612 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 562 - -
Amo15g0090 612 SUPERFAMILY Protein kinase-like (PK-like) 257 542 IPR011009 -
Amo15g0090 612 ProSiteProfiles Gnk2-homologous domain profile. 1 77 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0090 Amo-Chr15 3021775 3025321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0090 1 439 Receptor kinase-like Gene Family AT1G70530 57.500 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo15g0090 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0090 - - aip:107643328 1220.68